Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968977
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Entry
101968977 CDS
T10664
Symbol
Cwc27
Name
(RefSeq) spliceosome-associated protein CWC27 homolog isoform X2
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iti03041
]
101968977 (Cwc27)
03110 Chaperones and folding catalysts [BR:
iti03110
]
101968977 (Cwc27)
Enzymes [BR:
iti01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
101968977 (Cwc27)
Spliceosome [BR:
iti03041
]
Complex C
Other components
PPlases
101968977 (Cwc27)
Chaperones and folding catalysts [BR:
iti03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
101968977 (Cwc27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
DUF6235
Motif
Other DBs
NCBI-GeneID:
101968977
NCBI-ProteinID:
XP_005319627
UniProt:
I3LW47
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPG
FIVQGGDPTGTGTGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRA
DELNNKHTIFGKVTGDTVYNMLRLTEVDIDDDERPRNPHKIKSCEVLFNPFDDIIPREIK
KPKKEKPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLKNDP
HLSSVPAVESEKGDATGDLDDDGDESAEHDEYIDGDEKNLMRERIAKKLKKDTNANVKST
GEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENASKAEKKNEEEEAIPDGAVAEYR
REKQKYEALRKQQAKKGTSREDQTLALLNQFKSKLTQAIAETPENDISETEVEDDEGWMS
HVLQFEDKSRKVKDASMQDSDTFEIYDPRNPVNKRRREESKKLMREKKERR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatctacatccaggagcctcccacgaacgggaaggttttattgaaaactaca
gctggagatattgacatagaattgtggtcaaaagaagcacctaaagcgtgcagaaatttc
attcagctttgtttggaagcttattatgacaacaccatttttcatagagttgtgcctggt
tttatagtccaagggggagatcctactggcacagggactggcggagagtctatctatgga
gccccattcaaagatgaatttcactcacggttgcgttttaatcggagaggactggttgcc
atggcaaatgctggtcctcatgataatggcagccagtttttctttacactgggtcgagca
gatgaacttaacaataagcataccatctttggaaaggttacaggggacacggtatataac
atgctgcgactcacagaagtagacattgatgatgacgaaagaccacgtaatccacacaaa
atcaaaagttgtgaggttttgtttaatccttttgatgacatcattccaagggaaattaaa
aagcccaaaaaagagaaaccagaagaagaagtaaagaaattgaaacccaaaggcacaaaa
aattttagtttactttcatttggagaagaagctgaggaagaagaggaggaagtaaatcga
gttagtcagagcatgaaggggaaaagcaaaagcagtcatgacctgcttaagaatgacccg
catctcagttctgttccagctgttgaaagtgaaaaaggtgatgcaacaggagatttagat
gatgatggagatgaaagtgctgagcatgatgaatacattgatggtgatgaaaaaaacctg
atgagagaaagaattgcaaaaaagttaaaaaaggacacaaatgcaaatgtgaaatcaact
ggagagggagaagtggagaagaaatcagtcagccgcagtgaagagctcagaaaagaagca
agacaattaaagcgagaactcttagcagcaaaacaaaaaaaagtagaaaatgcatcaaaa
gcagagaaaaaaaatgaagaggaagaagctattccagatggtgccgtggcagaatataga
agagaaaagcaaaagtatgaagctttgaggaagcaacaggcaaaaaagggaacttcccgg
gaagaccagacccttgcgctgctgaaccagtttaaatctaaactcactcaagcaattgct
gaaactcctgaaaatgacatttccgaaacagaagtagaagatgatgaaggatggatgtca
catgtacttcagtttgaggataaaagcagaaaagtaaaagatgcaagcatgcaagactca
gacacatttgaaatctatgatcctcggaatccagtgaataaaagaagaagggaagaaagc
aaaaagctgatgagagagaaaaaagaaagaagataa
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