Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968984
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Entry
101968984 CDS
T10664
Symbol
Tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101968984 (Tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
DUF4537
Motif
Other DBs
NCBI-GeneID:
101968984
NCBI-ProteinID:
XP_040129010
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MNVKLSPNMMSRNNLEASTCKMTESFSFEKNESKLPPHDSLRSPGAHHNHPNFRLKSPEN
GNKKNNFLLCEQTKQYLVSQEDSSVSSNPNGINGEVGSKGDRKTLPAGNSVSPLSVGNNS
PPKEIKTKPSNSVSPAQSKKSHKLVENSLSISNPALFNSLGPPLRSTTCHRCGLFGSLRC
SQCKQTYYCSTACQRRDWSAHSIVCKPVQQSFHKLEDNKSPFETKNMEVKNESDCPLGVT
KEIATDTEKIMFSDLRSLQLKKTMEIKGTVTEFRHPSDFYVQLYSSEVLEYMNQLSASLK
ETYANMVQDEDYIPVKGEVCVAKYTVDQTWNRVIIQDVDVLQKKVQVLYIDYGNEEIIPV
NRIHQLNRNIDLFPPCAIKCFVAGVVPAEGNWSNDCIKTIKSLFMEQFCSIKIVDILNEE
VVTYAVDVMLQNSGKFLDHVLVEMGYGLKPKGQNSKKQSTDQSDPEDIGKMTAENKIVVD
RSDLIPKVLTVNVGDEFCGVVAHIQTPEDFFCQQLQSGHKLAELQAALSEYCGQASPRSD
FYPTIGDICCARFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLTRLCPIIPKLLE
LPMQAIKCVLAGVKPSLGIWTPEAICLMKKIVQNKMVTVKVVDRLENSSLVELTDKSLTP
SVSVTRALIDAGFAVEEKEMATDKPSGMKKASGSVPLGIEEVNPLKWTWVELAIDQTVDV
VVCMMYNPGEFYCHVLRENALKKLNDLNKSLAEYCQQKLPNGFKAEIGQPCCAFFTGDGN
WYRALVKDILPSGNVKVHFVDYGNAEEVTTDELQMIPSKFLQLPFQGIQCWLADIQPRNK
HWTKETIARFQMCVAGIKLQARVVEITENGVGVELTDLSTSYPRIISDVLINEHLVLKAG
SPHKDMPNNRPVNKRNHQIDTQGLQATSSAENWKTIELPVNKTVQASILEIINPNLFYAI
PDEMPENQEKLCILTAELLEYCNAQKSCLSYRPKIGDACCAKYTSDDFWYRAVVLGISDS
DVKVLYADYGNIETLPLSRVQPIAASHLEVPFQIIKCSLEGLMELNGSCSQLMIELLKNF
MLNQNVMLSVKGIIKNVHTVSVEKCSENGTVNVADKLVMYGLAKNITSKKQSALNKEKMH
RMNCCCTQLQKQVEKHEQILLFLLNNPTNQNKFIEMKKLLKS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaagttatcacctaatatgatgtcaagaaataatttggaagcatcgacttgt
aaaatgaccgaatcatttagttttgaaaaaaatgaaagcaagcttccaccacacgattcc
ttaagaagtcctggagcacatcataaccatcctaatttcaggttgaaaagtccagagaat
ggaaataaaaagaacaattttttgctttgtgagcaaaccaaacagtatttagtgagtcag
gaagacagttcagtatcttcaaaccctaatggcatcaatggagaagttggatccaaagga
gaccggaagacgttgccggcaggaaactcagtgtcaccattaagtgttggaaataattca
ccacccaaagaaataaaaactaagcccagcaatagtgtgtctcctgcacagtcaaaaaaa
tcacacaagttggttgaaaattccttgtccataagtaatccagcgctcttcaactcttta
ggacctccccttcggtcaacaacttgccatcgctgtggtctgtttgggtcgctgaggtgt
tctcagtgcaagcagacatactattgctccacggcctgtcagagaagagactggtctgcc
cacagcattgtgtgcaagcctgtccagcaaagtttccataaacttgaagataataagtca
ccttttgaaacaaagaacatggaagtgaaaaatgagagtgactgtccacttggggttact
aaagaaatagccactgatactgagaaaataatgttttctgacttgagaagtctacaactc
aagaaaaccatggaaataaagggtacagttactgaattcagacacccaagtgacttttat
gtccagttatattcttcagaagttttagaatacatgaaccagctctctgcaagtttaaaa
gaaacatatgcaaatatggtgcaagatgaagattatattccggttaagggggaagtttgt
gttgccaagtacacagttgatcagacctggaacagagtgataatacaagatgttgatgtg
ctacagaagaaggtacaagtcttgtatattgattatggaaatgaagaaataattccagta
aacagaattcaccaactgaacagaaacattgacttgtttcctccttgtgccataaagtgc
tttgtggctggtgttgtaccagcagaggggaattggagcaatgattgtatcaaaactatt
aaatcactgttcatggagcagttctgctctataaagattgtcgacatcttgaatgaagaa
gtggttacctatgctgtagatgtcatgctacaaaattcaggaaaatttttagaccatgta
cttgtagaaatgggatatggtttgaaacccaaaggacaaaattctaagaaacaaagcaca
gatcaaagcgatcctgaagatattggaaaaatgacagctgaaaataaaattgttgtagac
agaagtgacctaatccccaaggtgctaactgtaaatgtgggtgatgagttctgtggtgtg
gttgcccacattcaaacaccagaagacttcttttgtcaacaattacaaagtggccataag
cttgctgaacttcaggcggcgctcagtgagtactgtggtcaagcatctccacgctctgat
ttttatccgaccattggtgatatatgttgtgctcggttctcagaggatgaccagtggtac
cgtgcctccgttctggcctatgcttctgaagaatctgtacttgttggctatgttgattat
ggaaactttgaaatccttagtttaacaagactttgtcccataattccaaagttgttggaa
ttgccaatgcaagctataaagtgtgtgctggcaggagtaaagccatcattaggaatttgg
actccagaagctatttgtctcatgaaaaaaattgtacagaacaaaatggtcactgtgaaa
gtggtagacaggttggaaaatagctccctggtggaactcacagacaagtctctgacaccc
agtgtcagtgtcaccagagcgctcatagacgctggctttgctgtggaggaaaaggagatg
gcgacagataaacccagtggcatgaaaaaagccagtggcagtgttcccttgggtatagaa
gaagtaaatccattgaagtggacatgggttgagcttgctattgaccaaacagtagatgtc
gtggtctgcatgatgtataatcctggagaattttattgccatgtccttagagagaatgct
ttaaagaagctcaatgatttgaataaatcattagcagaatattgccagcagaagttgccg
aatggtttcaaggcagaaatagggcaaccttgttgtgctttttttacaggcgatggtaac
tggtatcgtgctttggtcaaggacattttaccaagtggaaacgtcaaagtgcactttgta
gattatggaaacgccgaggaagttactacagatgaactccaaatgataccatcaaaattt
ttacaacttccatttcaagggatacagtgctggttagcagatatacagcctagaaacaaa
cactggactaaagaaaccatagcaagatttcagatgtgtgttgcagggataaaactccaa
gccagagtggttgaaatcactgaaaatggggtgggagttgaactcaccgatctttccact
tcctatcccagaataatcagtgatgttcttattaatgaacatctggttttaaaagctgga
tccccacacaaggacatgccaaataatagacctgttaataaacgtaatcatcaaattgac
acccaggggcttcaagccacctcttcagcagagaattggaagactatagaattgccagta
aataaaactgtgcaagcaagcatactagaaatcataaacccaaacctgttttatgccatc
ccagatgagatgccagaaaatcaagaaaaactgtgtatattgacagctgaattgttagaa
tattgcaatgctcagaaaagctgtctgtcctacagaccaaaaattggagatgcatgctgt
gccaaatacacaagtgatgatttctggtaccgtgcggttgtactggggatatcagactct
gatgtgaaagtgctctatgcagactatgggaacatcgaaaccctgcctctttccagagtg
cagccaattgctgccagccacctggaggtccctttccaaatcattaaatgttcacttgaa
ggactgatggagttgaatggaagctgttctcaattaatgatagagctactaaaaaatttc
atgttgaatcagaatgtaatgctttccgtgaaaggaattattaagaatgttcatacagtg
tcggtggagaagtgttctgagaatggtactgtcaatgtggctgataagctggtgatgtat
gggctggcaaaaaacatcacatctaaaaagcaaagtgctttaaataaagaaaagatgcac
aggatgaattgctgctgtacacagttgcagaaacaagttgaaaaacatgagcagattctt
ctcttccttttaaacaatccaactaatcaaaataaatttattgaaatgaaaaaactgcta
aaaagttaa
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