Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969158
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Entry
101969158 CDS
T10664
Symbol
Rpgrip1l
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
iti
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101969158 (Rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101969158 (Rpgrip1l)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101969158 (Rpgrip1l)
Cilium and associated proteins [BR:
iti03037
]
Primary cilia and associated proteins
MKS complex
101969158 (Rpgrip1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
C2_C2CD3_N
Motif
Other DBs
NCBI-GeneID:
101969158
NCBI-ProteinID:
XP_021576988
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MSGPTDETAGDLPVKDIGLNLFGAGGLQETSTTRTMKSRQAISRVSREELEDRFLRLHDE
NILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLGRDVEMEEMIEQLQEKVH
ELERQNEVLKNRLISAKQHLQIQGYRPYNYVQSRVNTGRRKANENTGLQECSRKGIRLQD
VDVAETVQPVLTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENE
IELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFLQLQEKQKTLRIS
HDALMANGDELNMQLKEQRLKCCSLEKQLHSMTFSERRIEELQDRINDLEKERELLKENY
DKLYNSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERGPLINQNE
KLIQENRGLQLQCLEQKQQLDELKSHMKFFNQESDINADELSEALLLIKAQKEQKNGDLS
FLEKVDSKINKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTHKME
SLQQDYELKVEQYVHLLDVRAARIQKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETI
HLERGENLFEIHINKVIFSSEVLQASGDKEPVTFCTYAFYDFELQTTPIVQGLHPEYNFT
SQYLVHVNDLFLHYIQKNTVTLEVHQAHSTDYETLAACQLRFHEILEKSGRIFCTASLVG
TKGDIPNFGTVEYWFQLRVPMDQAIRLYRERAKALGYITSNFKGPKQMQLLSQQVPKTAQ
LSSTDSTEGNLNELDITIRCCNNLQSRARHLQPHPYVVYKFFDFADHDTAIIPSSNDPQF
DDHMCFPVPMNMDLDRYLKSESLSFYVFDDSDTQENIYIGKVNVPLISLAHDRCISGLFE
LIDHQKNPAGTIHVILKWKFAYLPPSGSITTEVEGNFIHREPEIVQALPPTSSVSTSVAV
PTPKPRRLTPVEKKVSFVDIMPHRDSCKETSPPPEDMKEISPEVDHTAKIEINTTTILNN
PKQVSQEGSIAKVKENTEKIQQEKDDDVSLLSEGQLAEQSLASSEDETEITEELEPEDEE
DRSDSDSDDCIIPNPISNNIKQPSEKIRIEIIALKLNDSPITTDDTIQRLFIECRFYSLP
AEETPVSLPKPKSGQWVYYNYSNVIYVDEENNQAKRDILKAILQNQEMPNRSVRFTVVTD
PPEDEQDLECEDIGVAHVDLADMFQKGRDIIEQNIDVFDARADGVGIGKLKVTVEALHAL
QSVYEQCKGLGVLKGPTPEASPTSE
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccaactgatgaaactgcaggagacctgcctgtgaaagatataggtctaaac
ctctttggagcaggagggttacaagaaacttcaacaacacggacaatgaagtctcgccaa
gcaatatcacgtgtcagtcgtgaagaactggaagacagatttttgcgtttgcatgatgag
aacattttacttaaacagcatgcccgtaagcaagaagataaaattaaaagaatggccacc
aagttaatacggctagttaatgacaagaaaagatatgagcgggttggtggcggccccaag
cggctgggacgagatgtggagatggaagaaatgattgagcagctgcaagagaaagttcat
gagcttgaaagacaaaatgaagtcctcaaaaacagactaatttcagccaaacaacacctt
caaatccaaggttacaggccatacaattatgtacagtctcgtgttaacactgggcgtaga
aaagcaaacgaaaatacaggcttacaggagtgctccaggaaaggtataagactccaagat
gtagatgtagcagaaactgtacaacctgtgcttacaaaatatggcaatagtttacttgaa
gaagccagaggagaaataagaaatttagaaaatgttattcagtcacaaagaggccagata
gaagagttagagcatttggctgagatcctaaaaactcagttgaggaggaaagaaaatgaa
attgagttatctcttcttcagcttcgagagcagcaagctacagatcaaaggtcaaatatt
cgggacaatgtagaaatgattaagcttcataaacaactagtggagaaaagcaatgcgctt
tcagtaatggaaggaaagtttcttcagcttcaagagaagcaaaaaactctcaggatcagc
catgatgccttgatggcaaatggagatgagctaaatatgcaactcaaagagcagcgttta
aaatgctgcagtcttgagaaacaattacattccatgacattttctgaaagaagaatagaa
gagctgcaggatagaataaatgatttagaaaaggaacgggaacttttaaaagaaaactat
gataaactttataacagtgccttcagtgctgcccatgaagagcaatggaagttaaaggaa
cagcagttgaaagtacagattgctcagctcgagactgccttaaaatctgatttaacagac
aaaactgaaatccttgacagattaaaaactgaaagaggacccttaataaaccaaaatgaa
aaactcattcaagagaatagaggacttcagttacagtgtctggaacaaaagcaacaactc
gatgaacttaaaagccacatgaagtttttcaaccaggagagtgatattaatgctgatgaa
ctgagtgaagctctcctgcttataaaggctcaaaaagaacaaaaaaatggagacctttca
tttttagagaaagtagacagtaaaattaataaagatctggaacgctccatgagagagctg
caagcaactcatgcagaaacagtgcaagaacttgaaaagacaagaaacatgctaatcatg
cagcataaaattaacaaagattatcagatggaagttgaggcagtgacccataagatggaa
agtttgcagcaagattatgaacttaaagtggaacaatatgttcatcttcttgatgtcagg
gctgcacgcatccagaaactagaagcccaattaaaggatattgcctatggcaccaaacag
tacaaatttaaaccagaaatcatgccagatgactctgtcgatgaatttgatgaaaccatc
cacctagaacgaggcgaaaatctatttgaaatccacatcaacaaagtaatcttttcttct
gaagttttacaggcatctggagataaagagcctgtcactttctgtacctatgctttctat
gattttgaactacagacaactcccatagttcaaggccttcacccagaatataacttcact
tctcaatatcttgttcatgttaacgacttatttttacattatattcagaagaatactgtc
acacttgaagtccaccaagctcacagcacagattatgaaacacttgcagcatgtcaattg
agattccatgaaattctagaaaaaagcggtcgaatattttgcacagcaagtttggttgga
actaaaggagacatcccaaattttggcacagtagaatactggttccaattaagagttccc
atggatcaagcaattcgactttatcgagaacgagcaaaggctttgggatatataacatca
aattttaaggggccaaagcaaatgcaattgttaagtcagcaagtacctaaaactgctcag
ctcagttcaacagattccacagaaggcaacttaaatgaacttgacattacaataagatgt
tgcaacaacctgcagtcccgagctcgccacctgcagccacacccatatgttgtgtacaag
ttttttgattttgcagaccatgatacagccatcattcccagtagcaatgatccacagttt
gatgatcatatgtgtttcccagtgccaatgaatatggatttggatcgataccttaagtca
gagtctctgagtttttatgtgtttgatgatagtgatacccaggagaatatttacatagga
aaagtcaatgtgcctttgatttcattggcacatgacaggtgtatctcaggactatttgag
ttaatagatcatcaaaagaatcctgcgggcactatccatgttatattaaaatggaaattt
gcttatcttccaccaagtggatcaataactactgaagttgaaggaaatttcatacacaga
gaaccagaaattgttcaggcactacctccaacatcctctgttagcacatcagttgcagta
ccaacacctaaacctaggcgtttaacacctgtagagaagaaagtgtcttttgtggatatc
atgccacatagggattcttgcaaagagacttctcctcctcctgaagatatgaaggaaatt
tcaccagaagtggatcatacagcaaaaatagaaattaatacaacaactattttaaataat
cccaagcaggtttctcaagaaggcagtatagctaaggtaaaagagaatactgagaaaatc
cagcaagaaaaagatgatgatgtgtctttactctctgagggtcaacttgcagaacaaagc
ttggcttcttctgaggatgaaacagaaataacagaagaattggaaccagaagatgaagag
gatagatcagattctgacagtgatgattgtattattccaaatcctatctccaataatatc
aaacagccatcagagaaaattaggattgagatcatagctttaaagcttaatgattctcca
ataaccacagatgacactatccaaaggctattcattgagtgccgattctacagtctccct
gctgaagaaacgcctgtgtcgcttccaaaacccaagagcgggcagtgggtctactataac
tatagcaacgtgatctacgtggatgaggaaaacaaccaagcaaagagagacatcttaaaa
gctatactacaaaaccaagaaatgcctaatagaagtgttcgtttcaccgttgtcaccgac
cccccagaggatgagcaggatctggagtgtgaggacatcggcgttgctcatgttgacctc
gctgacatgtttcagaaagggagagacatcattgagcaaaatatcgatgtttttgatgca
cgagcagatggtgtaggtattggcaagctcaaggtaacagttgaagctctccatgcccta
cagtctgtctacgagcaatgcaaaggactaggagtcttaaaaggacctactccagaggca
tctcctacttctgagtaa
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integrated database retrieval system
