Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969264
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Entry
101969264 CDS
T10664
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101969264 (L1cam)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101969264 (L1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101969264 (L1cam)
04090 CD molecules [BR:
iti04090
]
101969264 (L1cam)
04091 Lectins [BR:
iti04091
]
101969264 (L1cam)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
L1 family
101969264 (L1cam)
CD molecules [BR:
iti04090
]
Proteins
101969264 (L1cam)
Lectins [BR:
iti04091
]
I-type lectins (Siglecs)
101969264 (L1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
101969264
NCBI-ProteinID:
XP_021576119
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Position
X
Genome browser
AA seq
1256 aa
AA seq
DB search
MVVALWYVWPLLFCSPCLLIQIPDEYEGHHVMEPPVITEQSPRRLVVFPTDDISLKCEAR
GKPEVEFRWTKDGVHFKPKEELGVTVHEAPYSGSFTIAGNNSFAQRFQGVYRCFASNKLG
TAMSHEIQLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQ
DERVTMGQNGNLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKATNSMIDRKPR
LLFPTNSSSHLVALQGQPLVLECIAEGFPTPSIKWLRPSSPMPADRVSYQNHNKTLQLLN
VGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSRLYGPGETARLDCQVQGRPQ
PEVTWRINGIPIEELAMDQKYRIEQGALILSNVQPSDTMVTQCEARNRHGLLQTNAYIYV
VQLPVKILTGDNQTYMAVEGSTAYLLCKAFGAPVPSIQWLDEEGTTVLQDERFFPYANGT
LGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKEATQITQGPRSAIEKKGSRVTFTCQA
TFDPSLQPSITWRGDGRDLQELGDSDKYFIDDRRLIIHSLDYSDQGNYSCVASTELDEVE
SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNAPIEKYDIEFEDKEMAPEK
WYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPTSETVVTPEAAPEKNPVDV
KGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQDTRGIWQEQTVSDPFLVVSNTSTF
VPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQVSPELEGIKILNSSTVLVRWWPVDLAQV
KGHLRGYNVTYWWEGSQRKHSKRHVHKSHVVVPANTTSAILSGLRPYSSYHLEVQAFNGR
GLGPASEMTFSTPEGVPGHPEALNLECQSDTSLLLHWQPPLSHNGVLTGYVLSYHPLNAG
DKEQLSFDLPDPELRTHNLTNLSPGLRYHFQLQATTKEGPGEAIEREGGTMTLSGVPDFG
NISATAGENYSVISWVPKEGQCNFRFHIQFKALREGKAIIDPPRQYVSYNQSSYTQWDLQ
PDTKYEIHLLKEEVLLRQMAVKTNGTNPVRFSSNNFAMEGWFIGFVCAIILLLLILLILC
FIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIKP
LGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggcgctgtggtacgtgtggcctctcctcttctgtagcccctgcctgctcatc
cagatccccgacgaatatgaaggacaccatgtgatggagcctcctgtcatcaccgaacag
tctccacggcgccttgttgtcttccccacagatgacatcagcctcaagtgtgaggccaga
ggcaaacctgaagtggagttccgctggacaaaggatggagtccacttcaagcctaaggag
gaactgggtgtgactgtacatgaggcaccctactctggctccttcaccatcgcgggcaac
aacagctttgcccagagattccagggcgtctatcgctgctttgccagcaataagctgggc
actgctatgtcccatgagatccagctcatggctgagggtgcccccaagtggccaaaggag
acagtgaagcccgtggaggtggaggaaggggagtcagttgttctgccctgcaatccccca
cccagtgcagcgccactgcggatctactggatgaacagcaaaatcttgcacatcaaacag
gatgaacgagtgaccatgggccagaatggcaacctctactttgccaatgtgctcacctca
gacaaccactcagactacatctgcaacgcccacttcccgggtacccgaaccatcattcaa
aaggagcccattgacctccgggtcaaggccaccaacagcatgattgataggaagccacgc
ctcctttttcccaccaactccagcagccacctggtggccttgcaggggcagcccttggtc
ctggagtgcatcgctgagggcttccccacaccttccatcaagtggctacgccctagtagc
cccatgccagcagaccgtgtcagctaccagaaccacaacaagaccctgcaactgctgaat
gtgggcgaggaagatgacggcgagtatcgctgcttggctgagaattctctaggaagtgcc
cggcacgcctactatgtcaccgtggaggctgctccatactggctgcataagccccagagc
cgtctatacgggccaggagagactgcccgcctagactgccaagtccagggcaggcctcaa
ccagaggtcacttggagaatcaatggaatccctatagaagagttggccatggaccagaaa
taccggattgagcagggtgccctgatcctgagcaacgtgcagcccagtgacacaatggtg
acccagtgtgaggcccgcaaccggcatgggctcctccaaaccaatgcctacatctatgtt
gtccagctgccagtcaagatcctgacaggagacaatcagacatacatggcggtggagggc
agcactgcatacctgctgtgcaaggcctttggagctcctgtgcccagtatccagtggctg
gatgaggaaggcacgaccgtgcttcaggatgaacgcttcttcccttatgccaatgggacc
ctgggcatccgagacctccaggccaatgacactggacgctacttctgccaggctgccaat
gaccaaaacaatgtgaccattgtggctaacctgcaggttaaagaagcaacgcagatcacg
caagggccccggagtgcaattgagaagaaaggctcaagggtgacattcacatgccaggct
acctttgacccctccttacagcccagcatcacctggcgaggggatgggcgagaccttcag
gaacttggggacagtgacaagtacttcatagatgataggcgcctgatcatccacagcctg
gactacagtgaccagggcaactatagctgtgtggcaagcacagagctggatgaggtggag
agcagggcacagctcttggtggtcgggagccctgggcctgtgcctcatctggagctgtct
gatcgtcacttgctgaagcagagccaggtgcacctatcttggagccccgcagaagaccac
aatgcccccattgagaagtatgacattgaatttgaggacaaggaaatggcacctgagaaa
tggtatagtctgggtaaggtgccaggaaaccagacctctactaccctcaagctatcgccc
tacgtccactacacctttagggtaactgccatcaataaatatggccctggagaacccagc
ccaacttctgagactgtggtcacacctgaggcagccccagagaagaaccctgtggatgtg
aaaggggaaggaaacgagaccaacaacatggttatcacatggaagccactccgatggatg
gactggaacgcccctcaggtccagtaccgtgtgcaatggcgtcctcaggacacacggggg
atctggcaggagcagaccgtgagcgaccccttcttggtggtgtccaacacatccaccttt
gtgccctatgagatcaaagtccaggccgtcaacagccagggcaagggccctgaaccccag
gtcaccattggctattccggggaggactacccccaggtaagccctgagctggaaggcatc
aagatcctcaactcaagcactgtgctggtcagatggtggcctgtggacttggcccaggtc
aagggtcacctccggggatacaatgtgacatactggtgggagggcagccagaggaaacac
agcaagaggcatgtccacaaaagccatgtggtagtacccgctaacaccaccagtgccatc
ctcagtggcctgaggccctacagctcctaccatctagaggtgcaggcctttaacgggagg
ggattggggcctgccagtgagatgaccttcagtaccccagagggagtacctggccaccct
gaggcattgaacctggagtgccagtcagacaccagcctgctgctgcactggcaacccccg
ctcagccacaatggcgtgctcactggctatgtgctctcgtaccaccccctgaatgcagga
gacaaggagcagctgtcctttgaccttccggaccctgagcttcggacacacaacctgacc
aacctcagccccggcctgcggtaccacttccagcttcaggcaaccacgaaggaaggccct
ggcgaggccatcgagcgggaaggaggcaccatgaccttgtctggggtaccagattttggt
aacatctcggccacagcaggtgaaaactacagtgtcatctcctgggttcccaaagaaggc
cagtgcaacttcagattccacatccagttcaaagcattgagagaaggaaaggctatcatt
gatcccccacggcaatatgtcagctacaaccagagctcctacactcagtgggacttgcag
cctgacaccaagtatgagatccacctgctgaaggaggaggtgctcctgcgccagatggct
gtgaagaccaatggcaccaaccccgtgagattctcctccaataactttgccatggagggc
tggttcatcggcttcgtctgtgccatcatcctcctgctcctcattttgctcatcctctgt
ttcatcaagcgcagcaagggcggcaaatactcagtaaaggacaaggaggacacccaggtg
gactctgaggcccggccgatgaaagatgagacctttggcgaatacaggtccctggagagt
gacaatgaggagaaggcttttggcagcagccagccctctctcaacggagacatcaagccc
ctgggcagtgacgacagcctggctgattatgggggcagtgtggacgtccagttcaatgag
gatggctccttcattggccagtacagtggcaagaaagagaaggaagcagcaggaggcaat
gacagctcaggggccacctcccccatcaaccctgctgtggccctagaatag
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