Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969354
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Entry
101969354 CDS
T10664
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04064
NF-kappa B signaling pathway
iti04514
Cell adhesion molecules
iti04668
TNF signaling pathway
iti04670
Leukocyte transendothelial migration
iti04933
AGE-RAGE signaling pathway in diabetic complications
iti05143
African trypanosomiasis
iti05144
Malaria
iti05417
Lipid and atherosclerosis
iti05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101969354 (Vcam1)
04668 TNF signaling pathway
101969354 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101969354 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101969354 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
101969354 (Vcam1)
05143 African trypanosomiasis
101969354 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101969354 (Vcam1)
05418 Fluid shear stress and atherosclerosis
101969354 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101969354 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101969354 (Vcam1)
04090 CD molecules [BR:
iti04090
]
101969354 (Vcam1)
04091 Lectins [BR:
iti04091
]
101969354 (Vcam1)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
VCAM
101969354 (Vcam1)
CD molecules [BR:
iti04090
]
Proteins
101969354 (Vcam1)
Lectins [BR:
iti04091
]
I-type lectins (Siglecs)
101969354 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
C2-set
Ig_3
ig
Ig_2
V-set
C2-set_2
ICAM_N
ICAM1_3_5_D2
Ig_5
C1-set
Izumo-Ig
Ig_6
C2-set_3
Ig_4
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
101969354
NCBI-ProteinID:
XP_005339745
UniProt:
I3N2Q1
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MISSSQQQLKMPVALFGASNIFWMVFAASQAFKIETSPESRILAQIGDSVSLTCSTTGCE
SPVFSWRTQIDSPLNGKVKTDGTNSTLIMDPVSFENEHSYLCTATCGSEKLEKGIQVEIY
SFPKDPEIHFSGLLEVGKQVTVKCLIPDVYPFDRLEMDLWKDDHLMKNQEFLEDMDRKSL
ETKSLEVTFTPVMEDTGKALVCRAQLNIDETESVPQKRNTTKELQVYISPKNTVISVHPS
TRLQEGDSVTMTCSSEGLPAPKIIWNKKLDNENLQLLSGNETLTLIAMRMEDSGTYVCEG
VNSIGRSQKEVELIVEEKPFTVDIFPGPQVVAQIGDSVVLTCRVTGCESPSLSWRTQIDS
PLSGKVTSEGTESTLTLSPVGFENEHSYLCTVTCGRRKLEKRIRVELYSFPRDPEIEMSG
LLVNGNPVTVSCRVPNVYPFDHLEIELLNGETILMKKNFLEEMDRKSLETKSLEVTFTPT
TEDSGKVLVCRAKLHTGEMESEHKQRQSTQTLYVNVAPKDIQLTVFPSESVKEGDTVIIS
CTCGNIPETWIILKKKAETGDTVLKSIDGAYTILKVQLEDAGVYECESKNEVGSQLRNLT
LDVKGRDNTKDYFSPELLVLYCASSLIIPAIGMIIYFARKANMKGSYSLVEAQKSKV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatttcctcatcacagcagcaacttaaaatgcctgttgcgctctttggagcctcgaat
atattttggatggtgtttgcagcttctcaagcttttaaaatcgagacctctcctgaatcc
aggattctagctcagattggtgactccgtctccttgacttgcagcactacgggctgtgag
tctccagttttttcgtggagaacccagatagacagtccattaaatgggaaggtgaagact
gatggcacaaattccacattgatcatggaccctgttagttttgagaatgaacactcttac
ctgtgcacggcaacttgcggatctgagaaactggagaaaggaatccaggtggagatctac
tctttccctaaggatccagaaattcacttcagtggtcttctggaggtcgggaagcaggtc
acagtcaagtgcttgatccctgatgtatacccgtttgacaggctggagatggatttatgg
aaagatgatcatctcatgaagaatcaggaatttctggaagatatggataggaagtccctg
gaaaccaagagtttggaagtaacctttactcctgtcatggaggatactggaaaagctctt
gtttgtcgagctcaattaaacattgatgaaactgaatctgtgccccaaaaaaggaacact
accaaagaactgcaagtctacatctcacccaagaatacagttatctccgtgcatccctcc
acaaggctgcaagaaggtgattctgtaacaatgacatgttccagtgagggtctgccagct
ccaaagattatctggaacaagaaattagataatgagaatctacagcttctttctggtaat
gagactctcaccttaattgctatgaggatggaagattctggaacatatgtatgtgaagga
gttaattctattggaagaagccaaaaagaggtggaattaattgttgaagagaaaccattt
actgttgacatctttcctggacctcaggttgttgctcagataggggactcagttgtgcta
acatgccgtgtcacaggctgtgagtccccatctctctcttggagaacccagatagatagc
cctctgagcgggaaggtgacaagtgaagggacggagtccacactgaccctcagccctgtg
ggttttgagaatgaacactcttacctgtgcactgtcacctgtggacggaggaaactggaa
aaaagaatcagagtggagctctactcattccctagagatccagaaattgagatgagtggt
ctacttgtgaatggaaaccccgtcactgtaagctgcagggttcctaatgtgtaccctttt
gaccatttggagatcgaattacttaatggggagactattctgatgaaaaaaaactttttg
gaggaaatggataggaaatccctagagaccaaaagtttggaagtaaccttcacccccacc
acggaagatagtggaaaagttcttgtttgtcgggctaagttgcatactggtgaaatggaa
tctgaacacaaacaaaggcagagtacacagacgctttatgtcaatgttgctccaaaagac
atacagcttacagtgtttccttctgagagtgtcaaggaaggagacactgtcattatctct
tgcacatgtggaaatattccagaaacttggataatcctgaagaagaaagcagagacagga
gacacggtgctgaaatctatagatggcgcatacaccatcctcaaggtgcagctggaggat
gcaggagtatatgaatgtgaatctaaaaatgaagtgggctcacaattaagaaatttaaca
ctggatgttaaaggaagagacaataccaaggactatttttctcctgaacttctcgtgctc
tattgtgcatcctccttgataatacctgccattggaatgatcatctactttgcaaggaag
gccaacatgaaagggtcatacagtcttgtagaagcacagaaatcaaaagtgtag
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integrated database retrieval system
