Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969363
Help
Entry
101969363 CDS
T10664
Symbol
Snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101969363 (Snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101969363 (Snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101969363 (Snx5)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101969363 (Snx5)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101969363 (Snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR
Motif
Other DBs
NCBI-GeneID:
101969363
NCBI-ProteinID:
XP_040130220
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAAVPELLQQQEEDRNKLRSVSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQS
SEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKLGEGEGSMTKEE
FAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNXXXXXXXXXXLSVRRKNTK
EMFGGFFKSVVKSADEVLFSGVKEVDDFFEQEKNFLINYYNRIKDSCAKADRMTRSHKNV
ADDYIHTAASLQSLALEEPTVIKKYLLKVAELFEKLRKVEGRVSSDEDLKLTELLRYYML
NIEAAKDLLYRRTKALIDYENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKEE
LINFKRKRVAAFRKNLIEMSELEIKHARNNVSLLQSCIDLFKNN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggttcccgagttgctgcagcagcaggaggaggaccgtaacaagctgaggtct
gtgtctgtggacctgaatgttgatccctcacttcagattgacatacctgatgcactcagt
gagagagataaggtcaagtttacagtgcacaccaagactacactgcccacttttcagagc
tcagagttttctgttacaaggcaacatgaagacttcgtgtggctacatgatacacttatt
gaaaccacagactatgctgggcttattattccccctgctcctacaaaaccagatttcgat
ggtcctcgagaaaagatgcagaaactgggagagggtgaagggtctatgaccaaagaagag
tttgcaaagatgaagcaagaactggaagctgaatatctcgctgtctttaagaagactgtg
tcctctcatgaagtatttcttcagcggctttcttctcatcctgttctcagtaaagatcga
aacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctaagtgttaggcggaaaaataccaaa
gaaatgtttggtggcttctttaaaagtgtggtgaaaagtgctgatgaagttcttttttct
ggagttaaggaggtagatgacttctttgagcaagagaagaacttccttattaactattac
aacaggatcaaggattcctgtgctaaagctgacagaatgaccagatctcacaaaaatgtt
gctgatgactatattcacactgcggcctccttgcagagcctggctttagaagaacccaca
gtcatcaaaaaatacctattgaaggttgctgaactgtttgaaaaacttaggaaagtggag
ggtcgtgtttcatcagatgaagatttaaagctgacagagcttcttcgatactacatgctc
aatatagaggctgcaaaggatcttttatacagacgcaccaaagccctcattgactatgag
aactcaaacaaagctctggataaggcccggttaaaaagcaaagatgtcaagttggctgag
gcacaccaacaggaatgttgccagaaatttgaacagctttctgaatctgcaaaagaagaa
cttataaatttcaaacggaagagagtggcagcgtttagaaaaaacctaattgagatgtct
gaactggaaataaagcatgccagaaacaatgtctccctcttgcagagctgcattgactta
ttcaagaacaactga
DBGET
integrated database retrieval system
