Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969388
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Entry
101969388 CDS
T10664
Symbol
Hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101969388 (Hps3)
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
101969388 (Hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
101969388
NCBI-ProteinID:
XP_040126491
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MLIYSPFLKLLKQYEMVQDSRPSVKRTQRQKHPPGTKQYCEKAKGRTQRFPHSPKCNLEI
HLGFCYSGSLVPLSVCSFHNSEVSVITNSKCDLTSFSGDYLVAIEEKNKATFLRAYVNWR
SKKTENSRVCIRMVGHNVEAPFRETFRDQMSIVEMPLSEAPLCISCCPVKGDLLVGCTNK
LVLFSLKYQIIDEEFSVLDFERSLIVHIDCISPVEISFCVGYVAVMSDLEVLILKLESDP
KNGERVNHHSHKTHTPVKHTEEGTGSKTSQLETDDFVICQKPMELLGEKSEQSGLLVTLE
STGWADESTKYSHVQHLLYRRFTPDISFYSPSDEIKLHSLHLLPIYHTGSLTSDGKNLSQ
EKELLSLFCFFSLPHVGYLYMVVKSVELMSIYQYPEKSQQAVLTPQFLHVITSNNLQCFT
VRCSAAAAREEDPYMDTTLKACPPVSLDVCALRIQLFIGLKAICHFKNHIILLTKAEPEA
VPERKESPKRLLSRKDTSAKNRIPPAVEAGWNLYIVNTVSPMQLYKEMVDYSNTYKTIKT
QSCIHLLSEAHLLVRAALMDAGQLEPGEKAELLEAFKESCGHLGDCYSRLDTQHSHLALP
YYKMSGLTMAEVLARVDWAVDSEPQKYEKGLIFYINHSLYENLDEELSEELAAKVVQMFH
VTEPKQLPHVLCSPSMKNINPLTALSYLNKLDTYGFASILVTLTKAAVALKMGNIDMYRN
EMKSYSEMKLACGFILEPRLLIQQRKGQMVPTQLAAHLRESQPGLLVAAVLGLQKNNKIG
IEEADSFFKVLCGQDEDTIPQLLVDFWEAQLVACLPDVVLQELCFKLTSQYIWRLSKRQP
PDTTPLQTSEDLINACSHFGLIYPWVDVLISSDSLVDKNYKEDLSKLQSLICGPSFDIAS
IIPFLEPLSEDTVAGLSVHILCRTRLREYEQCLDMLLERCPQAVIPYANHELKEENRTLW
WKKLLPELCQRIKCGGEKYQLYLTSLKEVLSIVAVELELRDFLNVLPEDGTAAFFLPYLL
YCSRKKSLT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctacagccctttcttaaagctcctgaaacagtacgaaatggtgcaagatagc
aggccaagtgtgaaacgtactcaacgacaaaaacatccgcctggcacgaagcagtactgt
gaaaaggcgaagggaaggacacagcgattcccgcactcgccaaaatgcaacttagaaata
cacctaggattctgttactcagggtctttagttccgctatctgtgtgttcatttcataat
agtgaagtaagtgtaattacaaattccaagtgtgatctcacttccttttcaggagactac
ttggtagcaattgaagagaaaaacaaagccacatttctgcgtgcctatgtgaactggaga
agtaaaaagaccgagaactctcgcgtgtgcattcgaatggttgggcacaatgtggaggca
cccttcagagagaccttcagggaccagatgtctattgttgaaatgcccctttctgaggcc
cccttgtgcatttcctgttgcccagtgaaaggagacctccttgttgggtgcacaaataag
ttagtgttatttagtctgaagtatcagatcattgatgaggaattctcagtattggacttt
gaacgttctttaattgtacatatagattgcatcagtcctgttgaaatttctttttgtgtt
ggatatgttgctgtcatgtcagacttagaagtcttaatcctaaaactggagtcggaccct
aaaaatggagagagagttaatcaccattctcataagacccacactccagtgaaacacaca
gaagaaggcactggcagtaaaacttcacagcttgagacagatgattttgtgatctgccaa
aagcccatggaacttcttggtgagaagagtgaacagtctgggctcttggttacgctggag
tccacaggatgggctgatgaaagcacaaaatactcccacgttcagcacctgctctacaga
cgttttactcctgatatctcgttctacagcccgtctgatgaaatcaagttgcactccctt
cacctgctccccatttaccacacaggttcgcttacttctgatggaaaaaatttgtctcag
gaaaaagagttgctgagtctcttttgctttttctccctacctcatgtgggctatctctac
atggttgtcaagtctgttgaattaatgtcaatctaccaataccctgagaagtctcagcag
gccgtgctcacgccacagtttttacacgtcatcacaagcaacaacctgcagtgcttcacg
gtacggtgcagcgcagcggccgctcgcgaggaggacccgtacatggacaccaccctgaag
gcttgcccacctgtcagtttggatgtctgtgctttaagaatacagcttttcataggcttg
aaagccatctgtcactttaaaaaccacatcatactcttgaccaaagcagagcctgaggct
gttcctgagagaaaagagtcacccaagaggcttctttctaggaaagataccagtgctaag
aacagaatacctcctgcagtcgaggctgggtggaatttgtacattgtgaataccgtctct
ccaatgcaactctacaaagaaatggtcgactacagcaacacctacaagaccataaaaacc
cagagctgcatccacctcctcagcgaggctcatctattggtgagggcggccctgatggat
gccggccagctagaacctggagagaaagcagagcttttggaagcatttaaagaaagctgt
gggcacctcggagactgttacagcagactggacacccagcattcccacctggccttgccg
tactataagatgtctggcttgaccatggctgaagtcttggcgcgtgtggactgggcagtg
gacagtgaaccacagaaatacgagaagggattaatcttttatattaatcattcactttat
gaaaacctggatgaagaactaagtgaagaattagcagcaaaagtggttcagatgtttcac
gtgactgagccgaagcaactgccccatgttctctgcagcccttccatgaagaatattaat
cctttaactgccttgagctacctgaataagttggatacttatggatttgcctcaatccta
gtgacactgaccaaagcagcagtggctctgaaaatgggaaatatcgacatgtacagaaat
gaaatgaaaagctattcggagatgaagttggcgtgtggcttcattctggaacctcggctg
ctgattcaacaaaggaagggacagatggttccaacccagcttgcagcgcacctgagagag
tcgcagcctggcttgcttgtggctgcagtcctgggcttgcagaagaacaacaaaatcgga
attgaagaggctgattctttctttaaggtgctctgtggtcaggacgaagatacgattcct
cagctcttggtagacttttgggaagctcagttagtggcctgtctcccagacgtggtactt
caggaactctgtttcaagctcacatctcagtacatctggagattgtctaagaggcagcct
cctgacaccaccccgttgcaaacatcagaggatctgataaatgcctgcagtcactttggc
ttaatctacccgtgggttgatgtcttgatatcatctgattccttggttgataaaaattac
aaagaagacctttcaaaattacaatctcttatctgtggtccttcatttgacatagcttcc
atcattcccttcttggagccactctcggaagacactgttgctggcctcagtgtccacatt
ctgtgtcgtactcgcctgagagagtatgagcagtgcttggacatgctgctggagagatgc
ccacaggcggtcattccatatgctaatcacgaactgaaagaagagaaccggactctgtgg
tggaaaaaactgctgcctgagctttgtcagagaataaaatgtggtggagagaagtatcaa
ctttacctgacttcactgaaagaagtgctttcgattgttgctgtggaactggagctcagg
gatttcttgaatgtcctcccagaagatggtactgctgcattcttcttgccctatcttctt
tactgcagtcgcaaaaaatcactgacttga
DBGET
integrated database retrieval system
