Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969625
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Entry
101969625 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: DET1 homolog
KO
K10571
de-etiolated-1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101969625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101969625
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101969625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
101969625
NCBI-ProteinID:
XP_040126473
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MDHHVSTIKPRRIQNQNVIHRLKRRRISSGKAGPHWHQVGVFHQNVFPNFTVANVEKPPC
FLRTFSPDGCYFIAFPSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRL
FERFFVLLHITNVAANGEHLNRESSLFTDNCRXVIVGSAAYLPDEPHPPFYEVYRNSESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKVXLSHNQGLYLYKNILAILSVQQQTIH
VFQVTPEGTFIDVRTIGRFCYEDDLFTVSAVFPEVQQDSQTGMANPFRDPFINSLKHRLL
VYLWRRAEQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDPS
QASLFVVYNMVTTEVIAVFENTSDELLELFENFCDLFHNATLHSEVQFPYSASSNNFARQ
IQRRFKDTIINAKYGGHIEAVRRQLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPK
TCGDHP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcatgtttccactattaaacctcgaagaatccaaaaccaaaatgtcattcac
cgattgaaacggcggcggatcagttcaggcaaggcaggtcctcattggcaccaggttgga
gtgttccaccagaatgtcttccctaactttacagttgccaacgttgaaaaacctccttgt
ttcttgcgtacattctcacctgatggatgctactttattgcttttccttctgaccagaca
tctcttgaaatttatgagtaccagggctgccaagcagcagaggacctattgcagggatat
gagggggagatcctatccaatggcaatgaccagaggtcagtcaacatccggggcaggctt
tttgaacgatttttcgtcctgctgcacattacaaatgtagcagccaatggtgagcacctg
aaccgggagagtagcctcttcactgataattgccgatgagtgatcgtgggctctgctgcc
tacctcccggatgagcctcaccctcctttctatgaagtatatcggaacagtgaatcagta
accccaaatccacggtcccctctagaggactattccctccacatcattgaccttcacact
ggccgcttatgtgatacgcgcacattcaagtgtgataaagtgngtctgtcacacaatcaa
gggctgtacttgtataaaaacatcctggccatcttgtctgtgcagcagcagaccatccat
gtcttccaggtgactcctgaaggcacattcattgatgtgcggaccattggccgcttctgc
tatgaggatgacctgtttactgtgtcggctgttttccctgaagtacagcaggacagtcag
acaggcatggccaatccctttagggatcctttcatcaactccctaaaacaccggttgctg
gtatacctgtggcgccgggcagaacaggatggtagtgcaatggccaagaggcgcttcttc
cagtattttgaccagctgcggcagctgcgtatgtggaaaatgcagcttttggatgaaaac
catctgtttatcaagtataccagtgaggatgtagtgacactgcgagtcactgatccatct
caggcatctttgtttgtagtgtacaatatggtgacaactgaagtgattgctgtgtttgag
aatacatcggatgaacttttggaactctttgagaacttctgtgatctcttccataatgct
accttgcacagtgaagtccaatttccctactcagcctccagcaacaattttgcaaggcag
atccagcgccggttcaaagacacgattataaatgccaagtacggaggccacatagaggct
gtgcgccggcagctgggtcagctccccatcagtgcacagtcctacagtggcagcccctac
ctggatttgtctctcttcagctacgatgacaaatgggtgtcagtcatggagcgacccaag
acttgtggagatcacccc
DBGET
integrated database retrieval system
