Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969743
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Entry
101969743 CDS
T10664
Symbol
Pus10
Name
(RefSeq) tRNA pseudouridine synthase Pus10 isoform X2
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101969743 (Pus10)
Enzymes [BR:
iti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
101969743 (Pus10)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101969743 (Pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
TPD
Motif
Other DBs
NCBI-GeneID:
101969743
NCBI-ProteinID:
XP_013212590
UniProt:
I3M6Q9
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MFPLTEENKHVAQLLFSTGTCPRCIFRFCGVDFHAPYKHSYEELLNDMQKFLKAEKDELI
LEVPNPPLKKIRLQELEDGIDNLSQNGESKISVIEDGSIASPNSNLNVNVCNVCLGILQE
FCEKEFIKKVCQKVEASGFEFTNLVFSVSFPPQLSVREHAAWLLVKQEMGKQSLSLGRND
IVQLKEAYKWITYPLFSEELGVPIDGKSLFEVSVVFAHPETVGDCHFLGKIFPDCFKPAK
NKQSIFTRMAVMKALNKIKEEDFRKQFPCPPNSPKAVCTVLEIECAHGAVFVAGRYNKYS
RNLPQTPWIIDGERKLESSVEELISDHLLTVFKAESFNFSSSGREDVDVRTLGNGRPFAI
ELVNPHRVHFTSQEIKELQQKINKSSNKIQVRDLQLVSREAIGHMKEGEEEKTKTYSALI
WTNKVIQKKDIEFLNDIKDLKIEQKTPLRVLHRRPLALRTRVIHSMETHYMDEHHFRLYL
KTQAGTYIKEFVHGDFGRTRPNIGSLMNVTADILELDVESVDVDWPPALDD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtttccactgactgaggaaaataagcatgtggctcagttgttgttcagtactggcacc
tgtccaagatgtatcttcagattctgtggcgtggattttcatgcaccatacaaacattca
tatgaggagttgcttaatgatatgcagaaatttctgaaagctgaaaaagatgaattaatt
ttggaagttccaaacccacctctcaagaaaattcggcttcaagaactggaagatgggatt
gataatctgagtcaaaatggggagagcaagatctctgttattgaagatgggagcattgct
tccccaaattcaaatttaaatgtaaatgtatgcaatgtttgcctaggaattcttcaagaa
ttctgtgagaaagagttcattaaaaaggtgtgtcaaaaggttgaggcctctgggtttgaa
ttcacaaacttggtattttcagtctccttcccaccacagctctctgtaagagagcatgct
gcatggttgctggtaaaacaggaaatgggaaaacagagtctgtcactgggaagaaatgat
atagttcagctaaaagaagcctacaaatggataacataccccctgttttcagaggaactg
ggtgttcccattgatggaaagagcttgtttgaagtgagtgtggtctttgctcacccagaa
acagttggggattgccacttcctaggtaaaattttcccagactgtttcaagccagccaaa
aataagcagtcgatattcactagaatggcagttatgaaagctttgaataagataaaagaa
gaggatttccgcaagcagtttccttgtcctccaaactcaccaaaggctgtttgcactgtt
cttgaaattgaatgtgctcatggtgctgtttttgtggctgggagatacaataaatattcc
aggaatctaccacaaactccttggataattgatggagaaaggaagctggaatcttcagtg
gaagaattaatttcagatcatctgctgacagtattcaaagcagagagttttaatttctca
tcctctggaagagaagatgtagatgtgagaacattaggaaatggaaggccctttgcaatt
gagctggtgaatcctcatagagtacatttcacttcacaagaaattaaggaacttcagcag
aaaattaataagtcatctaacaaaatccaagtacgtgacttgcagcttgtctcaagagag
gcaataggacatatgaaagaaggtgaagaagaaaagactaagacctatagtgccttaata
tggacaaataaagtaatacagaagaaagacatcgaattcctgaatgatataaaggaccta
aagattgaacagaaaacccctctacgggtccttcaccgaagacccttggctttgagaact
cgtgtcatccactctatggagacacattatatggatgaacatcatttccgcctttatctg
aagactcaagctggaacctacattaaagagtttgtacatggagactttgggagaaccagg
ccaaacattggctctctgatgaatgtgactgctgacattcttgagctggatgtggagtct
gtagacgttgactggccacctgctctcgatgactag
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