Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101969766
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Entry
101969766 CDS
T10664
Symbol
Drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03008
Ribosome biogenesis in eukaryotes
iti05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101969766 (Drosha)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101969766 (Drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101969766 (Drosha)
03009 Ribosome biogenesis [BR:
iti03009
]
101969766 (Drosha)
03036 Chromosome and associated proteins [BR:
iti03036
]
101969766 (Drosha)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
101969766 (Drosha)
Messenger RNA biogenesis [BR:
iti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
101969766 (Drosha)
Ribosome biogenesis [BR:
iti03009
]
Eukaryotic type
90S particles
RNase
101969766 (Drosha)
Prokaryotic type
rRNA processing factors
101969766 (Drosha)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
101969766 (Drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
101969766
NCBI-ProteinID:
XP_013214235
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MMQGSMCHRMSFHPGRGCPRGRGGHGTRPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPS
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPVRPPYPNHQMRHPFPVPPCFPPM
PPPMPCPNNPPVPGAPPGQSTFPFLMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
NFNSFQNNPSSFPPSANNSSSPHFRHLPPYPVPKAPSERRSPERLKHYDDHRHRDHSHGR
GERHRSLDRRERGRSPDRRRPDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS
PSLERSYKKEYKRSGRSYGLPAVPEPAGCTPELPGEIIKNTDSWAPPSETVNHRSPSRER
KRARWEEEKDRWSDSQSSGKEKNYTSIKEKEPEETLPDKNEEEEEELLKPVWIRCTHSEN
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggcagtatgtgccatagaatgtcattccatccaggacgagggtgtccccga
ggacgaggaggacatggaaccagaccctcagcaccagctttcaggccccaaaatctgcga
ttgctccaccctcagcagcctcctgtgcaatatcaatatgaacctccaagtgccccttcc
actacgttctcgaactctccagcccccaattttctgcctccaaggccagactttgtaccc
ttccctccacccatgcctccatcagcacaaggccctcttcccccctgcccagtcaggccc
ccttatcccaaccaccagatgaggcaccccttcccagtgcccccctgttttcctcccatg
ccacctcccatgccttgtcctaataatcccccagtccctggagcacctcctggacaaagc
actttcccttttctgatgccccctccttccatgccccaccctccgccccctccggtcatg
ccacagcaggttaattatcagtatcctccaggatattcacaccacaatttcccacctccc
aattttaatagtttccagaataatccaagttccttcccacccagcgctaataacagcagt
agtcctcattttaggcatctccctccatacccagtcccaaaggctcccagtgagagaagg
tccccagaaaggctcaagcactatgatgatcacagacaccgagatcacagtcatgggcga
ggtgagaggcatcgttctctggatcgtcgggagcgtggccgcagtcccgacagaaggagg
ccagacagccgctaccgatcggattatgaccgggggaggacgccatctcgccaccgcagc
tatgagaggagcagagagcgggaacgggagagacacaggcaccgggacaaccgaagatca
ccatctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttatggttta
ccagctgttcctgaacctgccgggtgcacaccagaattacctggggagattattaaaaat
acagattcttgggccccaccctcggagactgtgaatcaccgatccccaagcagggagagg
aagagagctcgttgggaggaagaaaaagacaggtggagtgacagccagagctctggcaaa
gagaagaactacacatctatcaaggaaaaagagcctgaggagacactgcctgacaaaaat
gaggaggaggaagaagaactccttaagccggtgtggattcgatgtacccattcagaaaac
tactactccagcgaccccatggatcaagtgggagattctactgtagttgggacaagtagg
ctccgtgacttatatgacaaattcgaggaagagttggggagcaggcaagaaaaggccaag
gctgctaggcctccatgggagcctccgaagacgaaactagatgaagatttagagagctcc
agtgaatccgaatgtgagtctgacgaggatagcacctgttctagtagctccgactcagaa
gtttttgacgtcattgcagaaatcaaacgcaaaaaagcccaccctgaccgacttcatgat
gaactttggtacaatgacccaggccagatgaatgatggaccactctgcaaatgcagtgca
aaagcgagacgcactggaattcggcacagcatttatcctggagaagaggccatcaaaccc
tgccgccccatgaccaacaatgctggcagacttttccactatcggatcacagtctcccct
cctacaaactttttaactgacaggccaactgttatagaatatgatgatcatgagtatatc
tttgaaggattttctatgtttgctcatgcccctctgaccaatattccactgtgtaaagta
attagattcaacatagactatacgattcatttcattgaagagatgatgcctgagaatttt
tgtgtgaaagggctggaactcttttcactgtttctattcagagatattttggaattatat
gactggaatctcaaaggtcctttgtttgaagacagtcctccctgttgcccaagatttcat
tttatgccacgttttgtaagatttcttccagatggaggcaaggaagtgctgtcaatgcac
cagattcttctctacttgttacggtgtagtaaagccctggtacctgaggaggagattgcc
aatatgcttcagtgggaggagcttgagtggcagaaatatgcagaagaatgcaaaggcatg
attgttaccaaccctgggacgaaaccaagttctgtccgcatcgatcaactagatcgtgag
cagttcaaccctgatgtgattacttttccgattatcgtgcactttgggatacgccctgca
cagttgagttatgcaggagacccacagtaccagaaactgtggaaaagttatgtgaaactt
cgccacctcctagcaaatagtcccaaagtcaaacaaactgacaaacagaagttggcacag
agggaggaagcactccaaaaaatacgacagaagaatacaatgaggcgagaagtaactgtg
gaactaagtagccaaggattctggaaaactggcattcgttctgatgtctgtcagcatgca
atgatgctgcctgttttgacccatcatatccgctaccaccaatgcctgatgcacctggac
aagttgataggatatactttccaagatcgttgtctgttgcagctggccatgactcatcca
agtcatcatttaaattttgggatgaatcctgatcatgccaggaattctttgtctaactgt
ggaattcggcagcccaaatatggagacagaaaagttcatcacatgcacatgcggaaaaaa
ggaattaacaccttaataaatattatgtcacgccttggtcaagatgatccaactccttca
aggattaatcacaatgaacggttggaatttctgggtgatgctgttgttgagttcctgacc
agtgtccatttgtactatttatttcccagtctggaagaaggaggattagcaacctatcgg
actgccattgttcagaatcagcaccttgccatgctagcaaagaaacttgaactggatcga
tttatgctatatgctcatggaccggacctgtgcagagaatcggacctccgacatgcaatg
gctaattgttttgaagccttgataggagctgtttacttggagggaagcctggaggaagcc
aaacagttatttggacgcttactctttaatgatccggacctgcgtgaagtttggctcaat
tatcctctccacccactccaactacaagagccaaatactgatcgacaacttattgaaact
tctccagttctccagaaacttactgagtttgaagaagcaattggagtaatttttactcat
gttcgacttctggcaagggcattcacattgagaactgtgggatttaaccatctgacccta
ggccacaatcagaggatggaatttctaggtgattcaataatgcaactggtagccacagag
tacttattcattcatttcccagatcaccatgaaggacacttaactttgctgcgaagttct
ctggtgaataacagaactcaagccaaggtggcagaggagctgggcatgcaggagtacgcc
ataactaatgacaaaaccaagaggcccgtggcgctgaggaccaagaccttggcggacctt
ttagaatcatttattgcagcactgtacattgataaggatttggaatacgttcatactttc
atgaatgtctgtttctttccacgattaaaagagttcattttgaatcaagattggaatgac
cccaaatcccagctacaacagtgctgcttgacacttaggacagaagggaaagagccagac
attcccctgtataagactctgcagacagtggggccatcccatgctagaacctatactgtg
gccgtttatttcaagggagaaagaataggctgtgggaaaggaccaagtattcagcaagca
gaaatgggagcagcaatggatgcacttgaaaaatataactttccccagatggcccatcag
aagcggttcattgagcggaagtacagacaagagttaaaagaaatgaggtgggaaagagag
catcaagagagagagccagatgagactgaagacataaagaagtga
DBGET
integrated database retrieval system
