Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970027
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Entry
101970027 CDS
T10664
Symbol
Zc3h12d
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101970027 (Zc3h12d)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101970027 (Zc3h12d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
101970027
NCBI-ProteinID:
XP_005321414
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MERPSKMEFFQKLGYSREDVVRVLGKLGDGALVNDVLQELIQTGSRPGAQESPASSTGPL
LVPRGSCGVPDSAQRGLRSALEEDCGDLASSLRPIVIDGSNVAMSHGNKEAFSCRGIQLA
VDWFRERGHTYIKVFVPSWRKEPSRSDTPIREQHVLEELERQAVLVYTPSRKVNGKRVVC
YDDRYIVKVAYEKDGIIVSNDNYRDLQNENPEWKWFIEQRLLMFSFVNDRFMPPDDPLGR
RGPTLSNFLSRKPRPPEPSWQHCPYGKKCTYGIKCKFYHPERPHHAQLPVADELWAKTRA
WPGGGAEEPRPPSARGGPAAARPLPGEPCAHSLPRAPGTADLAALRAGFSRLAFSDDPAG
GFALGPRGSHWAPGPSSSPAGISATPGPPGLGALAPGLRSLPGPQSPFVPGDLPSPQVQV
RGGLGPRDLRGDLLPQRRPPDDPWAGLSGSEHFLGGSVWAEPSWGDGAFGGTLGSAPRAV
DREVDARARERTALCSVFPPDQVDSVMASFPALSDLARIIILLQRSQRADARLGNP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcccgagcaagatggagttcttccagaagttgggctacagccgggaggatgtg
gtcagggtgctgggcaagctgggagacggtgccctggtcaacgacgtgttgcaggaactg
atccagacgggcagccgccctggggcccaggagagccctgccagcagcactgggcctctg
ctcgttccccggggctcctgtggagtcccagactctgcccagcggggcttgaggtcagcc
ctagaagaggactgtggagacttggccagctccctgcgtcccatagtgatcgacggcagc
aatgtggcaatgagccatggaaataaagaagccttctcttgccggggaatccagctggct
gtggactggttcagggagagaggacacacctacatcaaggtttttgtcccatcctggagg
aaagagccatcgcgatctgacacccctatcagagagcagcacgttctggaggaactggag
cggcaggcggtgctggtgtacaccccgtcccgcaaggtgaacggcaagcgggtggtctgc
tatgacgaccgctacatcgtaaaggtggcctacgagaaggacggcatcattgtctccaat
gacaactaccgtgacctgcagaatgagaacccagagtggaagtggtttattgagcagagg
ctactcatgttctcctttgtcaatgatagatttatgcctcccgatgaccccctgggccgc
cgtggacccactctgagcaacttcctgagcaggaagccgaggcctccagagccatcctgg
cagcactgcccctatggcaagaaatgcacctacggcatcaagtgcaagttctaccacccc
gagaggccgcaccacgcacagctgcctgtggctgatgagctctgggccaagacgcgggcc
tggcccggcgggggcgccgaggagccgcggccgccgagcgcccggggcggccccgcagca
gcccggccgctccccggggaaccctgcgcgcacagcctcccgcgggcgccggggaccgcg
gacctggccgccctgcgcgcgggcttctcgaggctggcgttcagcgacgaccccgccggc
ggcttcgcgctcgggcctcgcggttctcactgggcgcccgggccctcctcctcgccggcg
ggcatctctgccaccccggggcctcccggcctgggggcgctggcgccgggcctgcgcagc
ctcccaggaccgcagagccccttcgtccccggcgacctcccgtcgccacaagttcaggtg
cggggcggacttgggccccgggacctgcgcggtgacctgcttccccagcgcagacctccc
gacgacccgtgggccggtctgtccggatccgagcactttctgggtggctcggtctgggcg
gagccgtcctggggcgacggcgcctttgggggaactctggggtctgctcccagggccgtg
gacagagaggtggacgctcgcgcccgtgagcgcactgcgctctgtagcgtcttccctccc
gaccaggtggacagcgtgatggcgtccttccccgccctctccgacctcgccaggatcatc
attctcctgcagcgatcccaaagggctgacgcgagactgggaaacccctaa
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