Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970048
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Entry
101970048 CDS
T10664
Symbol
Gcnt1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00512
Mucin type O-glycan biosynthesis
iti01100
Metabolic pathways
Module
iti_M00056
O-glycan biosynthesis, mucin type core
Brite
Enzymes [BR:
iti01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
101970048 (Gcnt1)
Glycosyltransferases [BR:
iti01003
]
Glycan extension
O-Glycan
101970048 (Gcnt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
101970048
NCBI-ProteinID:
XP_005324172
UniProt:
I3MX41
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All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MLRNLWRRRLFSCPTKYYFMILVLSLITFSVVRIHQKPEFVSVRHLELIGDNPSNNINCT
KILQGDANEIQKVKLEILTVKFRKRPRWTPSDYINMTSDCPSFIKMRKYIIEPLSKEEES
FPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDKKSEDSFIAAVMGIASCFSNVFVAS
QLENVVYASWSRVQADLNCMKDLYRMSANWKYLINLCGLDFPIKTNLEIVRKLKSFMGEN
NLETEKMPSNKEERWKKHHVVINGKLTNTGTVKGHPPLKTPLFSGSAYFVVSREYVRYVL
ENENIHKFMEWAQDTYSPDEYLWATIQRIPEVPGSLSLSHKYDLSDMQSVARFVKWQYFE
GDIAQGALYPPCNGVHVRSVCVFGAGDLNWILRKHHFFANKFDLDVDLFAVQCLDEHLRH
KALEMLEH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaatttatggcggaggagacttttttcttgtcccactaaatactattttatg
attcttgttttatccctaataactttctctgttgtaaggattcatcagaagcctgaattt
gtaagtgtcagacacctggagcttattggagataatcctagtaataatattaattgcacc
aaaattttgcagggtgatgcaaatgaaatccagaaggtaaagcttgagatactaacagtg
aaatttagaaaacgtcctcgttggacaccatctgactatataaacatgaccagtgactgc
ccttcattcattaagatgcgtaaatatattatagaacctcttagtaaagaagaggaaagc
ttcccaattgcatactccatagtggttcatcacaaaattgaaatgcttgacaggctcctg
agggccatctatatgcctcagaatttctactgcattcatgtagacaaaaaatcagaggac
tcctttatagcagcggtaatgggcatcgcatcctgtttcagtaacgtctttgtggccagt
cagttggagaatgtagtttatgcatcctggagtcgggttcaggccgatctcaactgcatg
aaggacctctacagaatgagtgccaattggaagtacttgatcaatctttgtgggttagat
tttcctattaaaaccaacctggaaattgtcaggaagctcaagtcgttcatgggtgaaaac
aacctggaaacggaaaagatgccatctaataaagaagaaaggtggaagaagcatcatgtg
gtcattaatggaaagttgactaatacggggactgtcaaagggcatcctccactcaaaaca
cctttgttttcgggcagtgcctattttgtggtcagtagggagtacgtgaggtatgtgcta
gagaatgaaaacattcacaagttcatggagtgggcacaagacacgtacagcccagatgag
tatctctgggccactattcagaggatccctgaggtcccaggctcactgtccttaagccac
aagtatgacttgtctgacatgcagtccgttgccaggtttgtcaagtggcagtactttgaa
ggtgacattgcccagggtgcactttacccaccctgcaacggggtccatgtgcgctcagtg
tgtgttttcggagctggcgacttgaactggatactacgtaagcaccacttttttgccaat
aagtttgacctggacgtcgatctctttgctgttcagtgtttggatgagcatctgaggcat
aaagccctggagatgttagaacactga
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