Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970072
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Entry
101970072 CDS
T10664
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03030
DNA replication
iti03410
Base excision repair
iti03420
Nucleotide excision repair
iti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101970072 (Rfc5)
03410 Base excision repair
101970072 (Rfc5)
03420 Nucleotide excision repair
101970072 (Rfc5)
03430 Mismatch repair
101970072 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101970072 (Rfc5)
03036 Chromosome and associated proteins [BR:
iti03036
]
101970072 (Rfc5)
03400 DNA repair and recombination proteins [BR:
iti03400
]
101970072 (Rfc5)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101970072 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
101970072 (Rfc5)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101970072 (Rfc5)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101970072 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
101970072 (Rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
nSTAND3
TIP49
AAA_7
TniB
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
101970072
NCBI-ProteinID:
XP_005329693
UniProt:
A0A287CSX4
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MEASAAKQQQQPATVKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNIMDLKTLKGLALHDILTEIHLFVHRVDFPSSVRIH
LLTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctcagcggccaagcagcagcagcagcccgcgacagtcaagatcaggaacctg
ccctgggttgaaaaataccggccacagacactgaatgatctcatttctcatcaggacatt
ctaagtaccattcagaaattcatcagtgaagaccgactgccacacctgcttctctacggc
cctccagggacaggaaagacatccaccatcctagcctgtgctaaacagctatacaaagac
aaagaatttggctccatggtcctggagctgaatgcttcagatgaccgaggaatagatatt
gttcgagggccaatcctgagctttgccagcacaaggacaatatttaagaaagggtttaag
ctagtgatcttggatgaagctgatgccatgacgcaggatgcccagaatgccttgagaaga
gtgattgagaaattcactgaaaataccagattttgcctcatctgtaactatctatccaag
atcatccccgccttgcagtctcggtgtacgaggttccggtttggtcccctgacacctgaa
ctcatggttccccgcctggaacatgtcgtagaagaagagaaagtcgatataagtgaagat
gggatgaaagcacttgtgactctctccagcggagatatgcgaagggctctgaatattttg
cagagcaccaatatggccttcgggaaggtgacagaggagactgtctacacctgcacaggg
cacccgctcaagtcagatatcgccaatattctggactggatgttgaatcaggacttcacc
acagcctacagaaatatcatggatttgaaaactctgaagggtttggcgttgcatgacatc
ctgaccgagattcacttatttgttcacagagtggactttccatcatcagttcgaatacat
ttactgaccaaaatggcagacattgagtacaggctttctgttggcaccagtgagaagatt
cagctgagctccctcattgctgcttttcaggttacccgagacctgattgtggcagaggcc
tag
DBGET
integrated database retrieval system
