Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970262
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Entry
101970262 CDS
T10664
Symbol
Sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04390
Hippo signaling pathway
iti04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
101970262 (Sox2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101970262 (Sox2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101970262 (Sox2)
Transcription factors [BR:
iti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101970262 (Sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101970262
NCBI-ProteinID:
XP_005330314
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHY
QSGPVPGTAINGTLPLSHM
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgcggag
tggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgcctgcga
gcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacg
ctcatgaagaaggataagtacacgctgcctggcgggctgttggcccccggcggcaacagc
atggcgagcggggttggggtgggcgccggcctgggcgcgggcgtgaatcagcgcatggac
agttacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctg
ggctatccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagcccatgcac
cgctacgacgtgagcgctctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagtatgtcctactcgcagcagggcacccctggcatggcgcttggc
tccatgggctcggtggtcaagtccgaggccagttctagcccccctgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctc
cccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccagcactac
cagagcggcccggtgcccggcacagccattaatggcacactgcccctctcgcacatgtga
DBGET
integrated database retrieval system
