Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970346
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Entry
101970346 CDS
T10664
Symbol
Gabrb2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04080
Neuroactive ligand-receptor interaction
iti04082
Neuroactive ligand signaling
iti04519
Cadherin signaling
iti04723
Retrograde endocannabinoid signaling
iti04726
Serotonergic synapse
iti04727
GABAergic synapse
iti05032
Morphine addiction
iti05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101970346 (Gabrb2)
04082 Neuroactive ligand signaling
101970346 (Gabrb2)
04519 Cadherin signaling
101970346 (Gabrb2)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101970346 (Gabrb2)
04726 Serotonergic synapse
101970346 (Gabrb2)
04723 Retrograde endocannabinoid signaling
101970346 (Gabrb2)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
101970346 (Gabrb2)
05033 Nicotine addiction
101970346 (Gabrb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101970346 (Gabrb2)
Ion channels [BR:
iti04040
]
Ligand-gated channels
GABA-A
101970346 (Gabrb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
101970346
NCBI-ProteinID:
XP_021582139
UniProt:
I3M2B1
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MWRVRKRGYFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKI
FYKDIKQNGTQYRSLWDPTGNLSPTRRTTNYDFSLYTMDPHENILLSTLEIKNEMATSEA
VMGLGDPRSTMMAYDASNIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPD
LTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtggagagtccggaaaaggggctactttgggatttggtcattccccttaataatcgcc
gctgtctgtgcgcagagtgtcaatgaccctagtaatatgtcgctggttaaagagacggtg
gatagactgctgaaaggctatgacattcgtctgagaccagattttggaggtccccccgtg
gctgtgggaatgaacattgacattgccagcattgacatggtttctgaagtcaatatggat
tataccttgacaatgtactttcagcaagcctggagagataagaggctgtcctataatgta
atacctttaaacttgactttggacaacagagtggcagatcagctctgggtgcctgatacc
tacttcctgaacgataagaagtcatttgttcatggagtgactgtcaaaaaccgcatgatc
cgcctgcatccagatggcacagtcctttatggcctcagaatcacaaccacagctgcctgc
atgatggacctgcggcggtacccactggacgaacaaaactgcaccttggaaattgaaagc
tatggatataccactgatgacattgaattttactggcgtggggatgacaatgccgtaaca
ggagtaaccaagattgagctcccgcaattctccatcgtagactacaaacttatcaccaag
aaggttgttttctccacagggtcctatcccagattgtccctcagctttaagcttaagaga
aatattggctacttcatcctgcaaacatacatgccttccatcttgattacgatcctctcc
tgggtctctttctggattaattatgatgcgtcagctgccagagtggctttaggaattaca
actgtactaacaatgaccacaatcaacactcacctccgggaaactctgcccaaaatccct
tatgtgaaggccattgacatgtacctaatggggtgctttgtcttcgttttcatggccctt
ctggaatatgctttggtcaactacatcttctttgggagaggaccccaacgccaaaagaaa
gcagcagagaaggctgctagtgccaacaatgagaagatgcgcctggatgtcaacaagatt
ttttataaagatattaaacaaaatgggacccaatatcgatccttgtgggaccccactgga
aacctctccccaactagacggactaccaattacgatttctctctgtatacgatggacccc
cacgaaaacatcttactgagcacacttgaaatcaaaaacgaaatggccacatcggaggct
gtgatgggactcggagaccccaggagcacgatgatggcttacgatgcctccaacatccag
tatcggaaagccgggctgcccaggcacagttttggtcgaaatgctctggaacgacacgtg
gctcaaaagaaaagtcgcctgcggagacgcgcctcgcaactgaagatcaccatccccgac
ttgactgacgtgaatgccatagataggtggtcccgcatattcttcccagtggttttttcc
ttcttcaacatcgtctattggctttattatgtgaactaa
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