Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970413
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Entry
101970413 CDS
T10664
Symbol
Trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101970413 (Trim16)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101970413 (Trim16)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101970413 (Trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
101970413
NCBI-ProteinID:
XP_005338923
UniProt:
I3N2Q4
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MTELDLMAPGPLPGVTAHPVAPLSSDSGSVSPTEEEDLGSPGRAVEETEGEGSSSAESGA
PGEDGEEDILCDFCLGTSKVKAVKSCLTCMVNYCEEHLRPHQENSKLHSHQLTEPSKDRD
LPTCSAHHSPLVAFCCSDQQCICQECGQDEHKDHTTVSLDAARRDKEAELRYTQLDLEQK
LKLNENAIARLQANHKSVLVSVSEVKVVAEEQFGELLAAVRKAQADVMLFLEEKEQAALN
QANGIKTHLEYRSVEMEKSKQELERLAAISNTVLFLEDYCKFKNTEDTAFPSVYIGLKDK
LSGIRKVITDSTLHLIQLLENYKEKLQEFSKEEEYDIKTQVSAIIQRKYRTSKPEPKTRK
EFLQYAHDITFDPDTAHRYLRLQEDNRKITNTTPWEHPYPDLPSRFLHWRQVLSQQSLYL
HRYYFEIEISGAGTYFGLTCKGIDRKGEERNSCISGNNFSWSLHWNGKEFTAWHSDTETP
LKAGPFRRLGIYVNFPGGTLSFYGVEYDSMTLVHKFDCKFSEPVYAAFWLSKKENAIRIV
DLGEEPEKPALSSVEPAS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactggatctgatggccccagggccattgcctggcgtcactgctcaccctgtg
gcccctctcagctcagattctgggtctgtcagccccacagaagaagaggacttgggctcc
cccgggagagctgtggaggagacagagggagagggcagctcctctgcagagtcaggggca
cccggtgaagatggggaggaggacatactgtgtgacttctgccttggaaccagcaaggtg
aaggcagtgaagtcctgtctcacctgcatggtgaattactgtgaggagcacctgcgtcct
catcaggagaacagtaagctgcacagccaccagctgactgagccatcaaaggaccgagac
ctacctacctgctctgcccaccacagccctctggttgccttctgctgcagtgaccagcag
tgcatttgccaggaatgtggccaggatgaacacaaggaccacactacagtctccctggat
gctgcccgcagagataaggaggctgaacttcggtacacccagttagacttggagcagaaa
ctcaagttgaacgaaaatgccattgccaggcttcaagccaatcacaagtctgttttggtg
tcggtgtcggaggtgaaggtggtagctgaagagcagtttggggaactgcttgctgctgtg
aggaaggcccaggcggatgtgatgcttttcttggaggagaaagagcaagctgctctgaac
caggccaatggcatcaagacccacctggagtacaggagtgtagagatggagaaaagcaag
caggagctggagaggttggcggccatcagcaacaccgtcctctttttggaggattactgc
aagttcaagaacacggaagacactgctttccctagtgtttacatagggctgaaggataaa
ctgtcaggcatccgcaaggtcatcacagactccaccctacacttaatccagctgttggag
aactacaaggaaaaactccaggagttctccaaagaagaggagtatgacatcaaaactcaa
gtttctgccatcattcagcgcaagtatcggacctcaaaacctgagcccaaaaccaggaaa
gagttcctccaatatgctcacgatatcacatttgacccggacacagcacataggtatctc
cgactgcaagaggacaaccgcaaaatcaccaacaccacaccctgggaacatccctatcca
gacctccccagcagatttctgcactggaggcaggtgctgtcccaacagagtctgtacctg
cacaggtactattttgagatagagatctccggggcaggcacttactttggcttgacctgc
aaaggaattgaccggaaaggggaggaacgcaacagttgcatttccgggaacaacttctcc
tggagcctccattggaacgggaaggagttcacagcctggcacagtgacacagagaccccc
ctcaaagctggccctttccggaggcttgggatctatgtcaacttcccgggagggaccctt
tccttctatggcgtagaatatgattccatgactctggttcacaagtttgactgcaaattt
tcagagccagtctatgcggccttctggctttccaagaaagaaaatgccatccggattgtg
gatctgggagaggaacctgagaagccagcgctgtcctcagtggagcctgcttcttag
DBGET
integrated database retrieval system
