Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970471
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Entry
101970471 CDS
T10664
Symbol
Lgr6
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 6 isoform X1
KO
K08399
leucine-rich repeat-containing G protein-coupled receptor 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101970471 (Lgr6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
iti04030
]
101970471 (Lgr6)
G protein-coupled receptors [BR:
iti04030
]
Rhodopsin family
Others
R-spondin
101970471 (Lgr6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRR_LRWD1
7tm_1
LRRNT
LRR_EndoS
LRR_R13L1-DRL21
LRR_Zer-1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
101970471
NCBI-ProteinID:
XP_005330398
UniProt:
I3MZ20
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MPSPLRLLALWLCAALCASPCAGGVPQLGPGRAACPVPCHCQEDGIMLSADCSELGLSTV
PVDLDPLTAYLDLSMNNLTELQPGLFRHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILM
LQNNELGGIPAEALWELPGLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVR
ALNNLPALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLD
LNYNELQEFPVAIRTLGRLQELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSA
FQYLPKLHTLSLNGATDIQEFPDLKGTSSLEVLTLTRAGIRLLPPEMCQQLPRLRVLELS
HNQIEELPSLRRCEKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFST
LRSLVKLDLTDNQLTTLPLAGLGGLMHLKLKGNLALSQAFSKDSFPRLRILEVPYAYQCC
AYGVCASFFKPSGQWQAEDFHLEEEEPPRRTQSLLTGQAENHYDLDLDELQLEMEDSKPH
HSVQCSPIPGPFKPCEHLFESWGIRLAVWAIVLLSVLCNGLVLLTVFAGGPIPLSPVKFV
VGAIAGANTLTGISCGLLASVDALTFGQFAEYGARWETGLGCRATGFLAVLGSEASVLLL
TLAAVQCSVSVSCVRAYGKAPSLGSVRAGALGCLSLAALAAALPLASVGEYGASPLCLPY
APPEGQPAALGFAVALVMMNSFCFLVVAGAYIKLYCDLPRGDFEAVWDCAMVRHVAWLIF
ADGLLYCPVAFLSFASMMGLFPVTPEAVKSVLLVVLPLPACLNPLLYLLFNPHFRDDLRR
LWPGPGAPGPLAFAAANELEKSSCDSTQALVAFSDVDLILEASEAGRPPGLETYGFPSVT
FISCQQPGGPRLEGSHFIEPEGTHFGNPQPSVDGELLLKAEGATSSGGGSSAGGGFRPFG
SVFASHL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcccgctccggctcctggcgctgtggctttgcgccgcgctgtgcgcctcccct
tgcgcaggcggcgtcccccagctgggcccggggcgtgctgcctgtccggtcccctgccat
tgccaggaggatggcatcatgctgtcagccgactgctctgagctcgggctctccactgtg
ccagtggacttggaccccctgacggcatacctagacctcagcatgaacaacctcacggag
cttcagcccggcctcttccgccaccttcgcttcttggaggaactgcgtctctctgggaat
catctctcacatattccaggacaagccttctctggtctctacagcctgaagatcctgatg
ctgcagaacaacgagctgggagggatcccggcggaagcgctgtgggagctgccgggcctg
cagtctctgcgcctggatgccaacctcatctctctggtcccagaaaggagctttgagggg
ctgtcctccctccgccacctctggctggatgacaatgcactcacagagatccccgtcaga
gccctcaacaatcttcctgccctgcaggccatgaccctggccctcaaccgcatcagccac
atccctgactacgccttccagaacctcaccagtcttgtggtgctgcatctgcacaacaac
cgcatccagcatctggggacccacagcttcgaggggctgcacaatctggagacactagac
ctgaattataacgagctgcaggagttccccgtggccatccggaccttgggcagactacag
gaactggggttccacaacaataacatcaaggctatccctgaaaaggccttcatgggcaac
cctctgctgcagacaatacacttttatgataacccaatccagtttgtgggaaggtcagca
ttccagtacctgcctaaactgcacacgctgtccctgaatggcgccacggacatccaggag
ttcccggacctcaaaggcaccagcagcctggaggtcctgaccctgacccgcgcaggcatc
cggctgctcccaccggaaatgtgccagcaactgcccaggctccgagtcctggagctgtct
cacaatcaaattgaggagctgcccagtctgcgcaggtgtgagaagttggaggaaatcggc
ctccaacacaaccgaatatgggaaatcggagctgacaccttcagccagctgagctcctta
caagccttggacctaagctggaatgccatcagatccatccacccagaagccttctcaacg
ctgcgctccctggtcaagctggacctgacagacaaccagctgaccacactgcctctggct
gggcttgggggcctgatgcatctgaagctcaaagggaacctggctctgtctcaggccttc
tccaaggacagtttcccaagactgaggattctggaggtgccctatgcctaccagtgctgt
gcctatggggtctgtgccagcttcttcaaaccctctgggcagtggcaggctgaggacttc
cacctggaggaggaggagcctccaaggaggacccagagcctccttactggacaagcagag
aatcactatgacctggacctggatgagctccaactggagatggaggactccaagccacac
cacagtgtccagtgtagccctattccaggccccttcaagccctgcgagcacctctttgag
agctggggcatccgcctggccgtgtgggccatcgtgctgctctcggtgctctgtaacggg
ctggtgctgctgaccgtgtttgccggcgggcccatccccctgtccccggtcaagtttgtg
gtaggtgcgatcgccggcgccaacaccttgacgggcatctcctgtggcctgctggcctcc
gtggacgccttgacctttggccagttcgccgagtacggagcccgctgggagacggggctg
ggctgccgggccacgggcttcctggccgtcctggggtccgaggcgtcggtgctgctgctc
accctggccgccgtgcagtgcagcgtctccgtgtcgtgcgtgcgggcctacgggaaggcg
ccctcgctgggcagtgtccgagccggggccctgggctgcctgtcgctggcagcgctggcc
gcggccctgccgcttgcctcggtgggcgagtacggggcctccccgctctgcctgccctac
gccccgcccgagggccagccggccgccctgggcttcgccgtggccctggtcatgatgaac
tccttctgcttcctggtggtggccggtgcctacatcaaactctactgtgacctgccgcgg
ggcgactttgaggccgtgtgggactgtgccatggtgaggcatgtggcctggctcatcttc
gccgatgggctcctctactgtcccgtggccttcctcagctttgcctccatgatgggcctc
ttccctgtcacccccgaggccgtcaagtctgtcctgcttgtggtgctgccgctgcctgcc
tgcctcaaccccctgctctacctgctcttcaacccccacttcagggatgaccttcggcgg
ctctggcccggcccaggagctcctgggcccctggccttcgcggctgccaacgagctggag
aagagctcctgcgattccacccaggctctggtggccttctctgatgtggatctcattctg
gaagcttctgaggctggacggccccctgggctggagacctatggcttcccctcagtgacc
ttcatctcctgtcagcagccagggggccccagactggagggaagccattttatagagcca
gagggaacccactttgggaatccacaaccctctgtggatggagaactgctgctgaaggcg
gagggagccacatcctcaggaggaggctcgtcggcgggtgggggcttcaggcccttcggc
tcagtctttgcttcacacttataa
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