KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970499
Entry
101970499         CDS       T10664                                 
Symbol
Csf1
Name
(RefSeq) macrophage colony-stimulating factor 1
  KO
K05453  macrophage colony-stimulating factor 1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010  MAPK signaling pathway
iti04014  Ras signaling pathway
iti04015  Rap1 signaling pathway
iti04060  Cytokine-cytokine receptor interaction
iti04061  Viral protein interaction with cytokine and cytokine receptor
iti04151  PI3K-Akt signaling pathway
iti04380  Osteoclast differentiation
iti04640  Hematopoietic cell lineage
iti04668  TNF signaling pathway
iti05010  Alzheimer disease
iti05022  Pathways of neurodegeneration - multiple diseases
iti05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101970499 (Csf1)
   04014 Ras signaling pathway
    101970499 (Csf1)
   04015 Rap1 signaling pathway
    101970499 (Csf1)
   04668 TNF signaling pathway
    101970499 (Csf1)
   04151 PI3K-Akt signaling pathway
    101970499 (Csf1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101970499 (Csf1)
   04061 Viral protein interaction with cytokine and cytokine receptor
    101970499 (Csf1)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    101970499 (Csf1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    101970499 (Csf1)
 09160 Human Diseases
  09163 Immune disease
   05323 Rheumatoid arthritis
    101970499 (Csf1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101970499 (Csf1)
   05022 Pathways of neurodegeneration - multiple diseases
    101970499 (Csf1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:iti04052]
    101970499 (Csf1)
Cytokines and neuropeptides [BR:iti04052]
 Cytokines
  CSF and other factors
   101970499 (Csf1)
SSDB
Motif
Pfam: CSF-1
Other DBs
NCBI-GeneID: 101970499
NCBI-ProteinID: XP_040145028
LinkDB
Position
Unknown
AA seq 596 aa
MGSPAGQAEVEGKRISPSAEETLLGEATSAALPACVSLCLENIRSQSHHPGEEQTWLGPW
LLLVCLLVSRSIAKEVSENCKHTIGNGHLQLLQQLIDSQMETSCNISFEFVDEEQLKDPV
CYLKKAFLLVQDIMEDTMRFKDSTPNARAMEKLQELPLTLKNCFTKDYEENDKACVRTFY
ETPLQLLEKIKNIFNETKILLEKDWNIFSKNCNSSFAECSSRDVVTKPDCNCLYPKATPS
SDLTSVSPQQPLTPSIAPMAGLTWDDSEGTEGSSLLPSEQPLRTVDPGHAKQRPPRSTCE
SLKSPETPGLEDRPPGGLPQPRPSAGAPIPGVEDILDSALATNWVLEEASGEASEGPGPQ
GAELSPSKPGGGSVQAEMARPRDLLSASSSLPLSTEDQQPMDVTGTPLPKVDPMRPTGQA
QSHAPEKTDRSSMLPRDHQEPSSPWISSQHPQGFGNPATLSAQTRLPRSHSQDIAPPLGE
LEGKRSTRDRRSPAELEGGQASEGAAGPLAHFNSVPLTDTGHKTEPAESPGPQSSEFVFH
LLVPSIILVLLAVGGLLFYRWRRRSHRELQILDSPMRLPEGSPLAQDEDTQVELPV
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggggtcccccgccggccaggcagaggtggagggcaagagaatcagccccagtgcagag
gaaacactgctcggggaagctacttctgctgctcttccagcctgcgtttccctgtgtctg
gagaatatcaggagccagtctcatcaccctggtgaggagcagacatggctgggcccctgg
ctgctgctggtctgtctcctagtgagcaggagtattgccaaggaggtttcggagaactgt
aaacacacgattgggaacggacacctacagttgctgcagcagctgattgacagtcaaatg
gagacctcatgcaacatttcctttgagtttgtagacgaggaacagttgaaagatcccgtg
tgctacctaaagaaggcatttctcctggtacaagacataatggaagacactatgcgcttc
aaagacagcacccccaatgccagagccatggaaaagctccaggaacttcctttgacgctc
aagaattgcttcaccaaggattatgaggagaatgataaggcttgtgtccggactttctat
gagactcccctccagttgctggagaagatcaaaaacatctttaatgaaacaaaaattctc
cttgaaaaggactggaatattttcagcaagaactgcaacagtagctttgctgagtgctcc
agccgagatgtggtgaccaagcctgattgcaactgcctgtaccccaaagccacccctagc
agtgacctgacctctgtctcccctcagcagcccctcaccccctccattgccccaatggct
ggcttgacctgggatgattctgaggggacagagggcagctccctcttgcccagtgagcag
ccccttcgcacagtggacccgggccatgccaagcagcgaccacctaggagcacctgcgag
agcctcaagtcaccagagaccccaggccttgaggacaggccccctgggggtttaccacag
cctcgcccctctgctggagcccccatccctggggtggaggacattcttgattctgcactg
gccactaactgggtcctagaagaggcctctggagaggctagtgagggtcctggaccccaa
ggggcagagctttccccctccaagccaggagggggcagtgtccaggcagagatggcccga
cccagagacctcctctcagcatcttcttcactccctctgtcaacagaggaccaacaacca
atggatgtaactggcacccccttgcctaaggtggaccccatgagacccactggccaagcc
cagagtcatgcccctgagaagacagaccgctcatccatgctgcccagagaccaccaggaa
ccaagctctccctggatctcctcacagcacccccaaggcttcggcaaccccgccaccctc
tctgctcagacacggcttcccagaagccactcccaggacattgcaccgccccttggggag
ctggaaggcaagaggagcaccagggatcggaggagcccagcagaactggaaggaggacaa
gcaagtgagggggcagctgggcccctggcccattttaactccgttcctttgactgacaca
ggccataagacagagcccgcggaatcccccggcccccagtcctctgagtttgtcttccac
ctgttggtgcccagcatcatcctggtcttgctggctgttggtggcctcctgttctacagg
tggaggcggaggagccatcgagagcttcagatattggattctcccatgaggctgccagag
ggcagccccctggcccaggatgaggacacacaggtggaattgccagtatag

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