Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970706
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Entry
101970706 CDS
T10664
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
Brite
Glycosaminoglycan binding proteins [BR:
iti00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101970706 (Slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101970706
NCBI-ProteinID:
XP_005318987
UniProt:
A0A287D3H5
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MRGIGWQTLSLSLGLVLAVLNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFVGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGTSKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPSACTCSNNIVDCRGKGLTEIPT
NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF
SPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLES
VRHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSL
STLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGN
DDNSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNY
KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPSRTFDGLKSLRLLSLHGND
ISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL
LLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDV
PIHACISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDG
INNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQDLNPCQHDSKCILTPRGFKCDCTPG
YIGEHCDTDFDDCQDNKCKNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDN
FDCQNGAQCIIRINEPVCQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQ
IATDEDSGILLYKGDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLA
LDQSLSLSVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGC
IRNLYINSELQDFRKVPMQTGILPGCEPCHKKVCAHGRCQPSSPSGFTCECEEGWMGPLC
DQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQTIKCKHGKCR
LSGLGQPYCECSSGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECKGGCA
GAQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcattggctggcagacgctgtccctgtcgctggggttagtgttggcggtcctg
aacaaggtggcgccgcaggcgtgcccggcgcagtgctcctgctcgggcagcactgtggac
tgtcacgggctggcactgcgcagtgtgcccaggaatataccccgcaacacagagagactg
gatttgaatggaaataacatcacacggattacgaagacagattttgtgggccttagacac
ttaagagttcttcagcttatggagaacaagattaccaccattgaaaggggagcattccag
gatcttaaagaactagagagactgcgtttaaacagaaatcaccttcagctgtttcctgag
ttgctgtttcttgggacctcgaagctatacagacttgatctgagtgaaaaccaaattcag
gcaattccgaggaaggctttccgtggggcagttgatattaaaaatttgcaactggattac
aaccagatcagctgtattgaagatggggcgttcagggctctccgggacctggaagtgctc
actctcaacaataacaacattactaggctttctgtggcaagtttcaaccatatgcctaaa
cttaggactttccgactccattcaaacaacctgtactgtgactgccacctggcctggctc
tccgactggcttcgccaaaggccccgggtgggcctgtacactcagtgcatgggcccttct
cacctgagaggccataatgtcgcagaggttcaaaaacgagaatttgtctgcagcgatgag
gaagaaggtcatcagtcgttcatggctccttcctgtagtgtgttgcattgcccgtctgct
tgtacctgtagcaacaacattgtagactgtcgcggtaaaggtctcactgagatccccaca
aacctgccagagactatcacagaaatacgtttggaacagaactcaatcaaggtcattcct
cctggagcattctcaccatataaaaagcttagaagaattgacctgagcaataatcagatc
tctgaacttgcacctgatgctttccaaggactgcgttctctgaattcacttgttctctat
ggaaataaaatcacagaactccccaaaagtttatttgaaggactattttccttacagcta
ctattattgaatgccaacaagataaactgccttcgggtagatgcttttcaggatctccac
aacttgaaccttctctccttgtatgacaacaagcttcagaccatcgccaaggggactttc
tcgcctctccgggccattcaaactatgcatttggcccagaacccctttatttgtgactgc
catctcaagtggctggcggattatctccataccaacccgattgagaccagtggtgcccgc
tgtaccagcccccgccgcctggcaaacaaaaggattggacagatcaaaagcaagaaattt
cgttgttcagctaaagaacagtatttcattccaggtacggaagattatcgatcaaaatta
agtggagactgctttgcagacttggcttgccctgaaaagtgccgctgtgaagggaccaca
gtagattgctccaatcaaaaactcaccaaaatcccggaccacattccccagtacactgca
gagcttcgtctcaataataatgaattcacagtattggaagccacaggaatctttaagaaa
cttcctcagttacgtaaaatcaactttagcaacaataaaatcacagatattgaggaggga
gcattcgaaggagcatctggggtaaatgaaatactcctcaccagtaaccgtttggagagt
gttcggcataagatgttcaagggattggaaagtctcaaaactttgatgttgagaagtaat
cgaataagctgtgtggggaacgacagtttcataggactcagttctgtgcgtttgctttct
ttatatgacaatcagattaccacgattgcaccaggggcattcgatactctccattcttta
tctactctaaacctcttggccaatccttttaactgtaactgctacctggcttggttggga
gagtggctcaggaagaaaagaattgtaactggaaatcctcggtgccagaaaccatacttc
ctcaaagaaatccccattcaggacgtggccattcaggacttcacttgtgatgatggaaat
gatgacaacagctgttccccactctctcgctgtcctacggaatgtacttgcttggataca
gtggtccgatgtagcaacaagggcttgaaggtcttgcccaaaggtattccaagagatgtc
acagagttatatctggatgggaatcaatttacgctggttcccaaggaactctctaactac
aaacatttaacacttatagacttaagtaacaacagaataagcaccctttccaatcaaagc
ttcagcaacatgacccagcttctcaccctaattctcagttacaaccgtctgagatgtatt
ccttctcgaaccttcgatggattgaagtctcttaggttactttctctacatggaaatgac
atttctgttgtgcctgaaggtgctttcaatgatctttcagcattatcacacttagcaatt
ggagccaaccctctttactgtgattgtaacatgcagtggctctccgactgggtgaagtcg
gagtataaggaacctggaattgctcgctgtgctggtcctggagaaatggcagataaactg
ttactcacaactccctccaaaaaatttacatgtcaaggccctgtcgatgtcaacattcta
gctaagtgtaatccctgcttatcaaatccctgtaaaaatgatggcacctgtaacaatgat
ccagttgacttttatcgatgtacctgcccctatggcttcaaggggcaggattgtgatgtc
ccaattcatgcatgcatcagtaacccatgtaaacatggaggaacttgccatttgaaagaa
ggggaaaaagatggattctggtgtatctgtgctgatggttttgaaggagaaaattgtgaa
gtcaatgttgatgattgtgaagacaatgactgtgaaaataattctacatgtgttgatggg
atcaataactacacatgcctttgcccacctgagtacacagctgctaatctgaatgaggtg
gaaaaaggcgagttgtgtgaggagaagctggacttctgtgcccaggacctgaacccgtgc
cagcatgactccaagtgcatcctgacgccaagggggttcaagtgtgattgcacaccagga
tacattggtgaacattgtgacactgactttgatgactgccaagataacaagtgtaagaat
ggtgcccactgcacagatgcagtgaatggttatacatgcatctgcccagaaggttacagt
ggcttgttctgtgagttttctccacccatggtcctccctcgtaccagcccctgcgataat
tttgattgtcagaatggagctcagtgcatcatcaggataaatgagccagtatgtcagtgt
ttacctggataccagggagagaagtgtgaaaaattggtcagtgtaaattttgtaaacaaa
gagtcctatcttcagattccttcagccaaggtccgacctcagaccaacatcacacttcag
atcgctacagatgaggacagcggcatcctcctgtacaagggtgacaaagaccatattgct
gtggagctctaccgagggcgggttcgcgccagctacgacactggctctcatccggcttct
gccatttacagcgtggagacgatcaatgatggaaactttcacatcgtggaactacttgca
ctggatcagagtctttccctctccgtcgatgggggaagccccaaaatcatcaccaacttg
tcaaaacagtctactctgaattttgactccccactctacgtaggaggcatgccagggaag
aacaacgtggcatctctgcgccaagcacccgggcagaatggcaccagcttccatggctgc
atccggaacctctacatcaatagtgaactgcaggacttccggaaggtgcccatgcagaca
ggcattctgcccggctgtgagccgtgccacaagaaggtgtgtgcccatggcaggtgccag
cccagcagcccatcaggcttcacgtgcgagtgtgaggaaggatggatgggccccctctgt
gaccagcggaccaatgacccctgtcttggaaataaatgcgtacatggcacgtgcttgccc
atcaatgccttctcctacagctgtaagtgcctggagggccatggaggtgtcctctgtgat
gaagaagaggatcttttcaatccctgccagacgatcaagtgcaagcatgggaagtgcagg
ctctcgggactcggacagccctactgtgaatgcagcagtggatacactggggacagctgc
gaccgagaaatctcttgtcgaggggaacggataagagattattaccaaaagcagcagggc
tacgcagcctgccaaaccaccaagaaggtctcacgcctggaatgtaaaggcgggtgtgca
ggggcccagtgctgtgggcctctgaggagcaagcggcggaaatactctttcgaatgcacg
gacggctcctcctttgtggatgaggttgagaaagtggtaaagtgtggctgcacgcggtgt
gcatcctag
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integrated database retrieval system
