Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970815
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Entry
101970815 CDS
T10664
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101970815 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101970815 (Trim54)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101970815 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
DUF349
Sina_RING
UvrD_C
FlgN
COG2_C
DUF5799
DUF1421
Zn_ribbon_FGT1_2
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101970815
NCBI-ProteinID:
XP_005322587
UniProt:
I3MH55
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELISKVGTMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGAAGEEEDEEVALDGDEGSAGPEEERLDGS
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggcttcaagccgctgctcggggatgcgcacagcatggacagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgccaatgatgtcttccaggcctcgaaccct
ctatggcaatcccggggctccactgctgtgtcttcaggaggccgtttccggtgcccatct
tgcaggcatgaggtggtcctggatcgacacggtgtgtatggcctgcagcgaaacctgcta
gtggagaacattatagacatttataagcaggagtcttctcggccactgcactccaaggct
gagcagcacctcatgtgtgaggaacacgaggaggagaagatcaatatctactgcttgagc
tgtgaagtgcctacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gctccactgcccactatttacaaacgccagaagagtgagctcagcgatggcattgcaatg
ctggtggcaggaaacgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accattgaggacaacagccgcaggcagaagcagttgctaaaccagaggttcgagaccctg
tgcgcggtgctggaggagcgtaagggcgagctcctgcaagcgctggctcgggagcaggaa
gagaagctgcagcgcgtccgcggactcatccgtcagtatggagatcaccttgaggcttcc
tctaaactggtggagtcagccatccagtccatggaggagccgcagatggcactatacctg
cagcaggccaaggagctgatcagtaaggtcgggacaatgtcgaaagtggagctagcggga
cggccggagccaggctacgaaagcatggagcaattttctgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagccgggcgccgctggggaagaagaggatgaggag
gtggcgctggacggggacgagggcagtgcaggaccagaggaagagcgactggacgggtca
gaagggctgcactga
DBGET
integrated database retrieval system
