Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970846
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Entry
101970846 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 A-like
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101970846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101970846
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101970846
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
U-box type E3
101970846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
101970846
NCBI-ProteinID:
XP_013217071
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MQEVFVEYIQPKDPSNGQMYQKTLLGVILNISCLLKTPGVAENHGYFLNPSRSSPQXIKV
QEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIF
FQMYASDAFFLNLGAALLKLCQPFCKPKSSRLLTFNPTYCALKELNDEERKIKNVHMRGL
DKETCLIPAVQEPKFPQNYNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQVAWRD
AQQSSSPAADNLRKQFEXLMIIYLSTKTAMTEPQMLQNCPNLQVSMAVLLVQLAIGNEGS
QPIELTFPLPDGYSSLAYVPEFFADKLGDFLIFLRRFADDILETSVDSLEHVLHFITIFT
GSIERMKNPHLRAKLAEVLEAVMPHLDQTPNSLVSSVFHRKRVFCNFPHAPQLAEALIKV
FVDIEFTGDPHQFEQKFNVXPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLR
FLNLLMNDAIFLLDEAIQYLSKIKIQQIEKDRGEWDSLTPEACREKEAGLQMFGQLACFH
NIMSNETIGTLAFLTSEIKSLFMHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDF
KPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSN
LAEKIKSLADLQQQEEETYADACGEFLDPVLSTLMSDPGLLPSSRVTVDRSTIARHSLSD
QTDPFNRSPLTMDQIRPNPELKEKIQRWLAERKQQQKEQQNKYCELSKPKTNPRV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggtttttgtagagtacattcaaccaaaggaccctagcaatgggcagatgtac
cagaagaccttgctgggagtcattctgaatatctcctgcttattaaagactccgggtgtg
gcagaaaatcatggctacttcttgaatccatctcggtccagtcctcagtagatcaaagta
caggaggccaacatccatcagttcatggctcagttccatgaaaagatctaccagatgctg
aagaacttactccagctctctccagaaaccaaacactgtatcttatcctggctgggaaac
tgtttgcatgcaaatgcaggccgcaccaagatttgggccaatcagatgccagaaatcttc
ttccagatgtatgcctcggatgccttctttctgaatctgggtgctgctctcctgaagcta
tgccagccattttgcaaacccaagtcctctcggcttctcacctttaatcctacttactgt
gctctgaaagagttgaatgatgaagaacgaaaaataaaaaatgtacacatgagaggtttg
gacaaagaaacctgtttgatcccagctgtgcaggagccaaagtttccccagaactacaac
cttgtaacagagaaccttgcactgacagagtataccttgtacttgggatttcacaggttg
catgatcagatggtaaaaatcaaccaaaatctgcatcggctacaggttgcctggagggat
gctcagcagagttctagccctgctgctgacaacctccgtaaacagtttgaatgactgatg
atcatctatctttcaaccaagactgccatgactgagccacagatgctacaaaactgccca
aatttgcaggtgtccatggctgttctgctggttcaactggctataggcaatgagggctca
cagccaatagagctaacttttcctttgccagatggctacagctctttggcttatgtgcca
gaattttttgcagataaactcggtgatttcctcatttttctccgccgctttgccgatgac
atcttggagacatcagtagattccttggagcatgtccttcactttatcaccattttcact
gggagcatagaaagaatgaagaatcctcacttaagggctaaactagctgaggtgttggaa
gcagtgatgccccacctggatcagaccccaaattccttggtatccagtgtgttccaccgg
aagcgtgtgttctgcaactttccacatgcaccccaacttgcagaagctctaatcaaggtt
tttgtggacatcgagtttacaggagacccccatcaatttgaacagaagtttaatgttnnt
cccatgtatcccatcctaagatacatgtggggaacagatacgtatcgggagagcattaag
gatttggctgactatgcctctaagaatttagaagctatgaaccctccacttttcctccgc
tttcttaacctgctaatgaatgatgccatcttccttttggatgaagctattcagtatctg
agcaagataaagatccagcagattgagaaggaccgaggtgaatgggatagtctgacccca
gaagcttgccgagagaaagaggctggcctgcagatgtttgggcagttggcatgttttcat
aacatcatgtccaatgaaacaattggtacacttgccttcctaacatcagaaatcaaatca
cttttcatgcatccttttctggctgagcgcatcatctctatgctgaactacttcctgcag
cacctggttgggcccaagatgggtgccttaaaagtcaaggacttcagtgaatttgacttc
aaaccccagcagcttgtatcagatatctgcactatctacttaaatcttggggatgaggag
aatttctgtgccactgtgcccaaggatggacgttcctattccccaactctctttgcacag
acagttcgagtcctgaagaaaataaataagcctgggaatatgattgtggcttttagtaat
ctggcagagaaaatcaagtctcttgcagacctccaacaacaagaagaggagacctatgca
gatgcctgtggtgagttcctggatcctgtcctgagcacactgatgtctgaccctgggctg
ctgccgtcctccagagtcactgtggatagatccaccattgccagacattcgctcagtgac
caaacagatccttttaaccgcagtcccctcaccatggaccagatccggccaaaccctgaa
ctaaaagaaaaaatccaacggtggcttgcagagaggaaacaacagcaaaaggagcaacag
aataaatactgtgaactaagcaaaccaaaaaccaaccccagagtgtaa
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