Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970856
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Entry
101970856 CDS
T10664
Symbol
Exosc5
Name
(RefSeq) exosome complex component RRP46 isoform X2
KO
K12590
exosome complex component RRP46
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101970856 (Exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101970856 (Exosc5)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101970856 (Exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101970856
NCBI-ProteinID:
XP_005336521
UniProt:
I3NDV0
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MERAIQADAKVYSEAGTESSPRGSGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLVLDPTAKQEKEARAV
LTFALDSVEQKLLMSTTKGLYSDAELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggcgatacaggctgacgccaaagtctatagtgaggctggaacagagtccagc
cctcggggctccggctgtagcctccggcactttgcttgtgaacagaacctgctgtctcgg
ccggatggctctgcttcttttctgcaaggtgatacctctgtcctggcaggtgtgtatggg
ccagccgaggtgaaggtcagcaaagagatcttcaacaaggccacgctcgaagtgatcctg
agaccaaagatcgggttgcctggtgtagcagagaagagccgggagcggttgatcaggaac
acttgtgaggcagtggtgctaggagcgctgcacccacgcacctccatcaccgtggtgctc
caggtagtcagcgatgcaggctctctcctggcctgttgcctgaatgctgcctgcatggca
ttggtggatgcaggtgtgcccatgcgagccctgttctgcggggtcacctgtgccctggac
tctgatgggaccctggtgctggaccccacagccaagcaagaaaaggaagcgcgagcagtc
ctgacctttgctctagacagtgtggaacagaagctactcatgtccaccaccaaggggctc
tactctgatgccgagctccagcagtgcctggctgctgcccaggccgcctcacagcacgtc
ttccgcttctaccgggaatcgctgcagaggcgctactccaagagctga
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