Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101970948
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Entry
101970948 CDS
T10664
Symbol
Cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00260
Glycine, serine and threonine metabolism
iti00270
Cysteine and methionine metabolism
iti00450
Selenocompound metabolism
iti00670
One carbon pool by folate
iti01100
Metabolic pathways
iti01230
Biosynthesis of amino acids
Module
iti_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
101970948 (Cth)
00270 Cysteine and methionine metabolism
101970948 (Cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
101970948 (Cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
101970948 (Cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101970948 (Cth)
Enzymes [BR:
iti01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
101970948 (Cth)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101970948 (Cth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
GDC-P
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
101970948
NCBI-ProteinID:
XP_005332400
UniProt:
I3LW54
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MQKKDASSLGFLPSFQHFATQAIHAGQEPEQWNFQDVVPPISLSTTFKQKAPGQHSGFEY
SRSGNPTRNCLEKAVAALDGAKYSLAFASGLAATMTITHLLKAGDQIICMDDVYGGTNRY
FRQVAPKFGLKLSFVDCSKTKLLEAAITPETKMVWIETPTNPNLKLIDIEACAHTVHKYG
NIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGIVSVNSEDIHDRLRFLQ
NALGAVPSPMDCYLCIRGLKTLQIRMEKHFKNGMAVAQFLESNPLIEKVIYPGLPSHPQH
ELAKRQCTGCSGMITFFIKGTLQHAETFLKNLKLFTLAESLGGYESLVELPAIMTHASVP
KSDRDILGISDTLIRLSVGLEDEKDLLEDLDQALKAAHPSSGNCD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaagacgcctcctcactcggtttcctacctagcttccagcatttcgccacg
caggccatccatgccggacaggaaccggagcaatggaatttccaggatgtggtgcctccc
atctcactctccactacgttcaagcagaaggcacccggccagcactcgggttttgaatac
agccgttctggaaatcccacaaggaattgcttggaaaaagcagtggcagccctggatggg
gccaagtacagtttggcctttgcttcgggtttagcagccactatgactattactcatctt
ttaaaagcaggagaccaaattatttgcatggatgatgtgtatggaggtacaaacaggtac
ttcaggcaggtggctcctaaatttggattaaagctttcttttgttgattgttccaaaacc
aaattgctagaggcagcaattacaccagaaaccaagatggtttggattgaaactcccaca
aaccctaacttgaagctgattgacattgaagcctgcgcacatactgtccataagtatgga
aacattattttggttgtggataacactttcatgtcggcatatttccagcggcctttggct
ctgggagctgatatttgtatgtattctgcaacaaaatacatgaatggccacagtgatgtt
gtaatgggcatagtgtctgttaattctgaagacatccatgatagacttcgtttcttgcaa
aatgctcttggagctgttccatctcctatggactgttacctctgcattcgaggcctgaag
actctacaaatccgaatggagaagcatttcaaaaatggaatggctgttgcccaattccta
gaatctaatcccctaatagaaaaagttatttatcctggtttgccctcccacccacagcat
gagttggcaaagcgccaatgcacaggttgctcagggatgatcaccttttttattaagggc
actcttcaacatgctgagactttccttaagaacctaaagttatttactctggctgaaagc
ttgggaggatacgaaagtcttgttgagcttccggcaatcatgacccatgcatcagtgcct
aagagtgacagggatatccttggaattagtgacacactgattcgactctctgtgggctta
gaggatgaaaaagacctgctagaagatctagatcaagctttgaaggcagcacacccttca
agtggaaattgcgactaa
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