Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971048
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Entry
101971048 CDS
T10664
Symbol
Usp43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101971048 (Usp43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101971048 (Usp43)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101971048 (Usp43)
Peptidases and inhibitors [BR:
iti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101971048 (Usp43)
Ubiquitin system [BR:
iti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101971048 (Usp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101971048
NCBI-ProteinID:
XP_005332926
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MDPGPGDAAGEGPPAPRPRRRRSLRRLFNRFLLALGSRSRSGDSPLRSRSQPQQGHCDGD
GEGGFVCPPGPAPAAPGSPGAEYPPGSQPPILAGDGARPPGAQGLKNHGNTCFMNAVVQC
LSNTDLLAEFLALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQF
QGNSQHDALEFLLWLLDRVHEDLEGSSRGLVSEKLPPEASQPSENFLSSSAQLSLGQSFV
QSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFLCKSQRFLRVGL
AVPILSTVASLRKMVAEEGGVPADEVILVELYPNGFQRSFFDEEDLNTIAEGDNVYAFQV
PPSPGQGTLSAHPSGLLGSPRLAAREGQRFSLPLHSENKVLILFCNLVGSGQQASRFGPP
FLIREDRTISWAQLQQCILSKVRYLMRSEAPAQNLGSLFSIRVVGLSLACSYLSPQDSRP
LCHWAVDRALHLRKLGGPPHIKLAVEWDSSAKECLFGSLQEERVQDAESVWRQQQTHQQP
SCTLDECFQFYTKEEQLAQDDAWKCPHCKVLQRGMVKLSLWTLPDILIIHLKRFCQVGER
RNKLSTLVRFPLSGLNMAPHVAQRSTSSKPVPGPWPSWKQPACLPTSYPLDFLYDLYAVC
NHHGSLQGGHYTAYCRNSLDGQWYSYDDSMVEPLREDEVNTRGAYILFYQKRNSIPPWSA
SSSMRGSTSSSLSDHWLLRLGSNNGHSTRGSLLSWSSAPCPSLAQVPDSPVLPNSLCHQE
KGGLESSSLVRGVPGRSISMKVPTPSRAKQGPFKTMPLRWSLGPKEKRPGPSVELVEYLE
SRRRPRSTSQSIVPLLTGAAGGEEKSASPRSNVTLSAKGEDSGRASGRGLAEAPCPSGHP
NHHPAPGFSDGLNTARTPKENASQDIRLPKKFDLPLTVTPSVNNEKVSRTEGQKSMNWKG
SGQVRSQSSPPSPSVGLFRNSKDSGQGTLPKMRATGEERSSEKDRLPQGTFTLLRSMFWK
KGNRKIDRTGGSPPLPPVSHGSGRLSPAVDKQMQSPSPALRMQDSLARGLGSYLERDVRS
APSSLHLPRKATRPPRTNATSTAQRSILGDQTSYGTLQKVKYHTLSLGRKKTLPESSF
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggacccgggcccgggggacgcggctggagaggggccgcccgcgccccggccccgccgc
cgccgctccctgcgccgcctcttcaaccgcttcctgctggcgctgggtagtcgctcccgc
tccggggactcgccgctccggtcccgatcccagccccagcagggacattgcgatggcgac
ggcgaagggggctttgtctgccctccgggcccggctcctgcggcccccgggagccccggg
gcagagtatcccccgggatcccagcccccgatcctcgcgggcgacggggcgcggccgccg
ggcgctcagggcttgaagaaccacggcaacacctgtttcatgaacgccgtggtgcagtgt
ctcagcaacaccgacctgctggctgagttcctggcgctggggcgctaccgggcggcgccc
ggccgcgcggaggtcaccgagcagctggcggcgctggtgcgcgcgctctggactcgcgaa
tatacgccccaactttccgccgagttcaagaatgctgtttccaagtatggctctcaattc
caaggtaattcccaacatgatgctctggaattcttgctctggttgctggatcgcgtccat
gaggacttggagggctcatcccgagggctggtgtccgagaagctgccacctgaagccagt
caaccctcagagaacttcttatcctcatccgcccagctttctctaggccaaagctttgtg
caaagccactttcaagcacaatacagatcttccttgacctgcccccactgcctgaaacag
agcaacacctttgatcctttcctgtgtgtgtcccttcccatccccttgcgccagacgagg
ttcttgagtgtcaccttggtcttcctctgtaagagccagcggttcctgcgggttggcctg
gctgtgccgatcctcagcacagtggcctccctgaggaagatggttgcggaggaaggaggc
gtccctgcagatgaggtgatcttggttgaactgtatcccaatggattccagcggtctttc
tttgatgaagaggacttgaataccattgcagagggagataatgtgtatgccttccaagtt
cctccgtcaccgggccaagggactctctcagctcatccatcgggtctgttggggtctcca
cgcttggcagcccgagagggtcagcgattctccctgcctctccacagtgagaacaaggtg
ctaatccttttctgtaacctggtggggtcagggcaacaggctagcagatttggaccacct
ttcctgataagggaagacagaactatttcctgggctcaactccagcagtgtattctcagt
aaggttcgctatctcatgaggagtgaggcccccgcacagaacctggggtctctgttctcc
atccgggttgtgggactttctctggcctgtagttacttatccccacaggacagtcggccg
ctctgtcactgggcagttgacagggccttgcacctcaggaagctgggagggcccccacac
atcaagctggccgtggagtgggacagttctgcgaaggagtgcctgtttgggagcctccag
gaggagcgagtgcaggatgcggagagcgtctggaggcagcagcagacccaccagcagccc
agctgtaccctggatgaatgttttcagttctacaccaaggaggagcagctggcccaggac
gacgcgtggaagtgcccccattgcaaagtcctccagcggggcatggtgaagctgagtctg
tggaccctgcctgatatcctcatcatccacctcaagaggttctgccaggtgggggagaga
agaaacaagctctccacgctggtgaggttcccgctctctggactcaacatggctccccat
gtggcccagaggagcaccagttccaagccagtgccaggcccctggccctcctggaagcag
ccggcctgcctgcccaccagctaccccctggacttcctgtacgacttgtacgcggtctgc
aaccaccacggcagtctgcaaggtgggcattacacagcctattgccggaactctctggat
ggccagtggtacagttacgatgacagcatggtggaaccccttcgagaagatgaggtcaat
acccgaggggcttacatcctgttttatcagaagcgaaacagcatccctccctggtccgcc
agcagctccatgagaggctccaccagctcctccttgtctgaccactggctcctgaggctc
gggagcaacaatggccacagcacgaggggaagccttttgtcctggagttctgccccctgc
ccgtccctggctcaggtgcctgactctcctgtcctcccaaacagcctctgccaccaggaa
aagggtggactggagtccagctctttggttcgaggtgttcctggcagaagcatcagcatg
aaggtgcccaccccttctcgagccaagcaggggcccttcaagaccatgcctctccgctgg
tccctgggccccaaggagaaacgtcccggtccgtctgtcgagctggtggagtacttggag
tccagacgaagaccccgatccaccagccagtccatcgtgccgctgctgacgggcgctgct
ggcggggaagagaagtcagcgtcaccaaggtcaaacgtcaccctttctgctaaaggtgaa
gacagtggccgagccagtgggagaggactagctgaggcgccttgtccctcgggccacccc
aaccaccatcctgcccctggattctccgatggtctcaacacagccaggacaccaaaggaa
aatgcaagccaggatatcaggcttcccaaaaagtttgatctgcccctcactgtgacgccc
tcagttaacaatgagaaagtgtcccgcacagagggccagaagagcatgaactggaaggga
agtggccaggtgagaagccagagcagcccaccctctccctctgtaggattgtttaggaac
agtaaggacagtggccaaggcaccttgcccaagatgagagccactggggaggaaaggtcc
tctgagaaagacagactcccgcagggcacattcaccctcctgaggtctatgttttggaag
aaaggaaataggaagattgataggactgggggctccccaccgctacccccagtctcccac
gggagtggcaggctgagccctgctgtggacaagcagatgcagagcccttctcctgccctg
aggatgcaggacagcctggccaggggcctgggcagctacctcgagagggacgtccgatcg
gcgcccagctctctccacctccctcgcaaagccaccaggcccccgagaaccaatgccact
agcaccgcccagagaagcattcttggggatcagacttcttatggcaccttgcaaaaggtg
aaataccacactctttctttaggtcggaaaaaaactttaccagaatctagcttctga
DBGET
integrated database retrieval system
