Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971140
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Entry
101971140 CDS
T10664
Symbol
Grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04020
Calcium signaling pathway
iti04024
cAMP signaling pathway
iti04080
Neuroactive ligand-receptor interaction
iti04082
Neuroactive ligand signaling
iti04713
Circadian entrainment
iti04720
Long-term potentiation
iti04724
Glutamatergic synapse
iti05010
Alzheimer disease
iti05014
Amyotrophic lateral sclerosis
iti05017
Spinocerebellar ataxia
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
iti05030
Cocaine addiction
iti05031
Amphetamine addiction
iti05033
Nicotine addiction
iti05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101971140 (Grin2c)
04024 cAMP signaling pathway
101971140 (Grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101971140 (Grin2c)
04082 Neuroactive ligand signaling
101971140 (Grin2c)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101971140 (Grin2c)
04720 Long-term potentiation
101971140 (Grin2c)
09159 Environmental adaptation
04713 Circadian entrainment
101971140 (Grin2c)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101971140 (Grin2c)
05014 Amyotrophic lateral sclerosis
101971140 (Grin2c)
05017 Spinocerebellar ataxia
101971140 (Grin2c)
05020 Prion disease
101971140 (Grin2c)
05022 Pathways of neurodegeneration - multiple diseases
101971140 (Grin2c)
09165 Substance dependence
05030 Cocaine addiction
101971140 (Grin2c)
05031 Amphetamine addiction
101971140 (Grin2c)
05033 Nicotine addiction
101971140 (Grin2c)
05034 Alcoholism
101971140 (Grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101971140 (Grin2c)
Ion channels [BR:
iti04040
]
Ligand-gated channels
Glutamate (ionotropic)
101971140 (Grin2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
DUF63
Motif
Other DBs
NCBI-GeneID:
101971140
NCBI-ProteinID:
XP_040124602
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MEGDKPLSWLLSQPCPSEDAQLIAVSFSVSVFVCLSVPLFMEGGVPLFSFLFWMCPLTLT
SCLSVHLPLSVHVLVSPQDPLVDMGGALGPALLLTSLLGAWAGSGLGQGQQAMTVAVVFG
SSEPPQAQAQARIRLTPQNFLDLPLEIQPLTVGVNSTNPSSLLTQICGLLGAARVHGIVF
EDNVGTEAVAQLLDFVSSQTHAPILSISGGSTVVLTPKVLSDLLCLPPFQHGTGDQGCLR
QKVRDGVAILALGAHSYLRHHGALPAPVGDCRSHPGPVSPAREAFYRHLLNVTWEGRDFS
FSPGGYLVQPTMVVIALNRHRLWEMVGRWDHGVLYMKYPVWPRYSASLQPVVDSRHLTVA
TLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDAAPYTKLCCKGFCIDILKKLA
KVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNL
TKGKKPGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKF
NQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKD
SHWKRAIDLALLQFLGDGETQKLETVWLSGICHNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLALLVFAWEHLVYWKLRHSVPNTSQLDFLLAFSRGIYSCFSGVQSLASPARPPSPDLTA
GSAQASVLKMLQAARDMVTTAGVSSSLDRATRTIESWGSSRHHLSASERCALSERPLSPA
HCHYSSFPRADRSGRPFLPLFPEPPEPDDLPLLGPEQLAQREALLRAAWARNPRPRHASL
PSSVAEAFTRPGLLPARYTGHACSCPTSRPACRHLAQAQSMRLPSYPEACRQGVPAGVLA
WQPRQHVCLHAHAHLPFCWGAVCPHFPPCASHGPWLPGSWGPPVNRGRTLGLSTDYRDSG
VLEEVSRGACGTKGSRRPCTWRRISSLESEV
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgacaagcccctgtcctggctcctgtcccagccctgtccctctgaggatgct
cagctaattgctgtctctttctctgtgtctgtctttgtctgtctgtctgtacctctcttt
atggagggaggtgtgcccctcttctctttccttttttggatgtgtcctctgaccctcaca
tcgtgtctgtctgtccatctgcctctctctgtgcatgtcctggtctctccacaggaccct
ctggtggacatgggtggggccctggggccagccttgctgctcacctcgctccttggtgcc
tgggcagggtccggcttggggcagggccagcaggctatgacagtggccgtggtgtttggc
agctcagagccaccgcaggcccaggcccaggcccgtatccgcctcaccccccagaacttc
ttggacctgcctctggagatacagccgctcactgtgggagtcaacagcaccaaccccagc
agccttctcacccagatctgtgggctcctgggtgctgcccgggtccacggcatcgtcttt
gaggacaatgtgggcaccgaggcagtggcccagctcctggactttgtctcctcccagacg
cacgcgcccatcctcagcatcagcgggggctccacggtggtcctcacccccaaggtgctg
tctgatctcttgtgccttcctcccttccagcatgggactggggaccagggctgcctgcgc
cagaaggtccgcgacggcgttgccatcctggccctgggtgcccacagctacttgcgccat
cacggcgccctgcccgcacctgttggggactgccgcagccaccctggacctgtcagccct
gcccgggaagcattctacaggcacttactgaatgtcacctgggagggccgagacttctcc
ttcagccctggtgggtacctggtccagcccaccatggttgtgattgccctgaaccggcac
cgcctctgggagatggtggggcgctgggatcatggagtcctctacatgaagtaccccgta
tggcctcgctatagtgcctccctgcagcctgtggtggacagccggcacctgacagtggcc
accctggaagagcggccctttgtcattgtggagagccctgaccctggcaccgggggctgc
gtacccaacactgtgccctgccgcaggcaaagcaaccacaccttcagcagcggtgacgca
gccccatacaccaagctctgctgcaagggcttctgcatcgatatcctcaagaagctagcc
aaggtggtcaagttctcctacgacctgtacctggtgaccaatggcaagcacggcaagagg
gtgcgcggcgtgtggaacggcatgattggggaggtgtactacaagcgggcagacatggcc
atcggctccctcaccatcaatgaggagcgatcggagatcgtggacttctccgtgcccttc
gtggagacgggcatcagcgtgatggtggctcgcagcaatggcaccgtctccccctcggcc
ttcctggagccctacagccccgcagtgtgggtgatgatgtttgtcatgtgtctcaccgtg
gtggccatcactgtcttcatgttcgagtacttcagccccgtcagctacaaccagaacctc
accaagggcaagaagcccgggggcccgtccttcaccatcggcaagtctgtgtggctgctg
tgggcactggtgttcaacaactcggtgcccatcgagaacccccgcggtaccaccagcaag
atcatggtcctggtgtgggccttcttcgccgtcatcttcctcgccagctacactgcaaac
ctggctgccttcatgatccaggagcagtacatcgacaccgtgtcaggcctcagtgacaaa
aagtttcagaggcctcaggatcagtacccgcccttccgctttggcacagtgcccaatggc
agcacagagcggaacatccgcagcaactaccgggacatgcacacccacatggtcaagttc
aaccagcgatcagtggaggatgcgctcaccagcctcaagatggggaagttggacgccttc
atctatgatgccgctgtcctcaactacatggcgggcaaggatgaaggctgcaagctggtc
accattggatctggcaaagtctttgctaccactggctatggtatcgccatgcagaaggac
tcccactggaagcgggccatagacctggcactcctgcagttcctgggggatggagagacc
cagaaactggagacagtatggctctcagggatctgccacaatgagaagaatgaagtgatg
agcagcaagctggacattgacaatatggctggggtcttctacatgctgctggtggccatg
gggctggccctcctggtcttcgcctgggagcacctggtctactggaagctgcgtcactca
gtgcccaacacatcccagctggacttcctgctggctttcagcaggggcatctacagctgc
ttcagtggggtgcagagcctggccagccccgcaaggccgcccagcccagacctcacggcc
ggctcggcccaggccagcgtgctcaagatgctgcaggcggcgcgcgacatggtgaccacg
gcgggcgtgagcagctccctggaccgcgccacgcgcaccatcgagagctggggcagcagc
cgccaccacctctcggcttccgagcggtgcgcgctctcagagcgccccctgtcccctgcg
cactgtcactacagctccttcccccgagccgaccggtccggacgccccttcctccctctc
ttcccggagcccccagagccggacgacctgccgctgctggggccagagcagctggcccag
cgggaagccctgctgcgcgcagcctgggcccggaacccacgcccgcgccacgcttctctg
cccagctcggtggccgaggccttcactcggcctggcttgctgcctgccaggtacaccggc
cacgcttgctcctgccccaccagccggccggcctgcaggcacttggcgcaggcacagtcg
atgcggctgccctcttacccggaggcctgcaggcaaggcgtgccagcaggggtcctcgcc
tggcagcccagacagcacgtctgcctgcacgcccatgcccacctgccattttgctggggg
gctgtctgccctcattttccaccctgcgccagtcatggcccttggcttcctgggtcctgg
gggcctccagtgaacaggggcaggaccttgggactgagcacggattacagggacagtggg
gtgctggaagaggtcagcaggggagcctgtgggaccaaaggctcccgaagaccctgcacc
tggaggcggatctcaagcctggagtcagaagtgtga
DBGET
integrated database retrieval system
