Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971251
Help
Entry
101971251 CDS
T10664
Symbol
Afg3l2
Name
(RefSeq) AFG3-like protein 2
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101971251 (Afg3l2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101971251 (Afg3l2)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
iti03110
]
101971251 (Afg3l2)
Peptidases and inhibitors [BR:
iti01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
101971251 (Afg3l2)
Chaperones and folding catalysts [BR:
iti03110
]
Other chaperones and cochaperones
AAA proteases
101971251 (Afg3l2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
TIP49
AAA_5
AAA_28
AAA_22
RuvB_N
IstB_IS21
AAA_16
ThcOx
AAA_17
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
101971251
NCBI-ProteinID:
XP_040131218
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
VILQLYRYASAQATTSRNSLLIDVIAAYQRFCSRPPKGFEKYFPNGKNGKKTSEPQEVTG
EKKESKTAATPRSSGGGGAGGGKRRGKKDDSHWWSRFQKGDFPWDDKDFRMYFLWTALFW
GGVMFYFLFKSSGREITWKDFVNNYLSKGVVSIYEFAATMFQEVQFRREQTPLDIQYVWF
NIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRG
PAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQ
DLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVSLVLF
LIFLIPVYSPHMLTWQRCPCPQGLQRNLPPVTALSTMDKLAARPVTSTHLPRPTRTQFGI
VRTVRVCDSTMLNVAGALGAHPSPQMHLFSAPCCLIRCIFTIIFSGFNTTTNVVILAGTN
RPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTP
GFSGADVANVCNEAALIAARHLSDSINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYH
EAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVS
EEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATA
RLIDDEVRVLINDAYKRTVALLTEKKAEVEKVALLLLEKEVLDKNDMVELLGPRPFAEKS
TYEEFVEGTGSLDEDTSLPEGLKDWNKEREKEKEEPSGEKVATQMQGWRPF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
gttatcttgcagctttatcgatatgcttcagctcaagcaacaaccagcagaaattctctt
ctgatagatgtaattgctgcttatcaacgattctgttctcgacctcccaaaggatttgaa
aaatattttcctaatggaaaaaatgggaaaaaaactagtgaacctcaagaagttacggga
gaaaaaaaagaatcaaaaacagctgctaccccacgctcatctggaggaggaggtgctggt
ggaggaaaacgccgcggcaagaaagatgattctcactggtggtccaggttccagaagggt
gactttccctgggacgacaaggatttcaggatgtactttctctggactgctctgttttgg
ggtggagtcatgttttacttcctgttcaagagctctgggagagaaatcacatggaaggac
ttcgtcaataactatctttctaaaggagtagtaagtatttatgaatttgcggccaccatg
tttcaagaggtgcagttcaggagagagcaaacaccccttgatattcaatatgtgtggttt
aatattggcagtgtagacacctttgagcggaatctggaaaccttacagcaggaattgggc
atagaaggggaaaatcgggtacctgttgtctacattgctgaaagtgatggctcttttctg
ctgagcatgttgcctacagtgctcatcatcgcttttctcctgtacaccataagaagaggg
cctgcaggcattgggcgaactggccggggcatgggtggcctcttcagtgttggggaaacc
acagccaaggtcttaaaggatgaaatagatgtgaaattcaaagatgtggctggttgtgag
gaagccaagctggagatcatggaatttgtaaatttcttgaaaaacccaaagcagtatcaa
gacctaggagcaaaaatcccaaagggtgccattctcactggtcctccaggcacggggaag
acactgctagctaaggccactgctggagaagccaacgtccccttcatcactgttagtgga
tctgagtttttagagatgtttgttggtgtgggtccagcaagagtaagtcttgttcttttc
ctcattttccttatccccgtttattctccccacatgttgacttggcaaagatgcccctgc
cctcagggtctccaaaggaacctcccaccggtcactgccttgagtactatggacaagctt
gcagcaaggcctgtgacttcaactcaccttcccagaccaaccagaacacagtttggaata
gtaagaacagttcgggtttgtgactcaaccatgttaaatgtagctggggccttgggtgct
catccttctccacagatgcacttattctctgccccatgctgtttaatccgttgcattttc
actatcatcttttcaggttttaacacaacaacaaacgtagtcattttggcgggcaccaac
cgaccagatatcctggatccagcgctgatgcggccagggcgctttgacaggcagatcttc
attggtccaccagacataaaaggaagagcctctatttttaaagttcatctccgaccactg
aaactggatagcaccctggagaaggaaaagctggccagaaaactggcctctttaactcca
gggttttcaggagctgatgttgccaatgtctgtaatgaggctgctttgatcgctgcaaga
cacctctctgattccataaatgagaaacactttgaacaagcaattgagcgagtgattggt
ggcctggagaaaaaaacccaggttctgcagcccgaggagaagaagacagtggcgtaccat
gaagcaggtcatgcggttgctggctggtatctggagcatgcagaccctctcttaaaggtt
tccatcatcccccgtggcaaaggattgggctatgctcagtacctgcccaaggagcaatac
ctatacaccaaggagcagctcttggacaggatgtgcatgactttaggcggtcgtgtctct
gaagagatcttctttggaagaatcacaactggtgcccaggatgacctgaggaaagtcact
cagagtgcttacgcccaaattgttcagtttggcatgaatgaaaaggtggggcagatctcc
tttgacctcccacgtcagggcgacatggtattagagaagccctacagtgaagccaccgcc
aggctcatagatgatgaggtgcgggtgctgattaatgatgcctataaaagaaccgtcgcc
ctcctcacagagaagaaagccgaggtggagaaggttgctcttctattgttagaaaaagaa
gtattagataaaaatgatatggttgaacttctgggccctagaccatttgcagaaaagtct
acatatgaagaatttgtggaaggcactggcagcttggatgaagacacttctcttcctgag
ggcctgaaggactggaacaaggagcgggaaaaggagaaagaggagccctccggcgagaaa
gtcgccacccagatgcaagggtggagaccgttttag
DBGET
integrated database retrieval system
