Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971304
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Entry
101971304 CDS
T10664
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04066
HIF-1 signaling pathway
iti04137
Mitophagy - animal
iti04140
Autophagy - animal
iti04148
Efferocytosis
iti04659
Th17 cell differentiation
iti04919
Thyroid hormone signaling pathway
iti05167
Kaposi sarcoma-associated herpesvirus infection
iti05200
Pathways in cancer
iti05205
Proteoglycans in cancer
iti05208
Chemical carcinogenesis - reactive oxygen species
iti05211
Renal cell carcinoma
iti05230
Central carbon metabolism in cancer
iti05231
Choline metabolism in cancer
iti05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
101971304 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101971304 (Hif1a)
04137 Mitophagy - animal
101971304 (Hif1a)
04148 Efferocytosis
101971304 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101971304 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
101971304 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101971304 (Hif1a)
05205 Proteoglycans in cancer
101971304 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
101971304 (Hif1a)
05230 Central carbon metabolism in cancer
101971304 (Hif1a)
05231 Choline metabolism in cancer
101971304 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
101971304 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
101971304 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
101971304 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101971304 (Hif1a)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101971304 (Hif1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
101971304
NCBI-ProteinID:
NP_001269181
UniProt:
Q64F54
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MEGAGGTNDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHXVSSHLDKASVM
RLTISYLLVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHGLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
EDQQLEEVPLYNDVMFPSSSEKLQNINLAMSPLPASETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPQSVSTISVFQ
QTQIQEPTINTTTATTDELKTVTKDDMEDIKILIASWSPTHAPKETTSATTSSYNDTQSR
TASPNRAGKEVIEQTEKSHPRSPNVVSVTLSQRNTVPEEELNPKILALQNAQKKAKMEQD
GSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLLGQ
SMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggaggcacgaacgacaagaaaaagataagttctgaacgtcgaaaagaa
aagtctagagatgcagccagatctcgacgaagcaaagagtctgaagttttttatgaactt
gctcatcagttgccacttccccatawcgtgagctcacatcttgataaggcttctgttatg
aggcttaccatcagttatttgcttgtgaggaaacttctggatgctggtgacctggatatt
gaagatgaaatgaaggcacagatgaactgcttttatttgaaagccctggatggctttgtt
atggtgctcacagatgatggcgacatgatttacatttctgataacgtgaacaaatacatg
ggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccgtgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccctgtgaaaaagggtaaagaa
caaaacacacagcgaagcttttttcttagaatgaagtgtaccctgactagccggggaaga
actatgaacataaagtctgcaacatggaaggtacttcactgtacaggccatattcacgta
tatgataccaacagtaaccaatctcagtgtggatacaagaaaccaccaatgacatgcctg
gtattgatttgtgaacccattcctcatccatcaaatattgaaattcctttagacagcaag
acttttctcagtcgacacagtctggatatgaaattttcttattgtgatgaaagaattact
gaattgatgggatatgagccagaggaacttttgggccgctcaatttatgaatattatcat
gctttggactctgatcatctgaccaaaactcatcacgatatgtttactaaaggacaagtc
accacaggacagtataggatgcttgccaaaagaggtggatatgtctgggtagaaactcaa
gcaactgttatatataacaccaagaactctcaaccacaatgcattgtatgtgtaaattat
gttgtaagtggtattattcagcacggcttgattttctcccttcaacaaactgaatgtgtc
ctcaaaccagttgaatcttcagatatgaaaatgactcagctcttcaccaaagttgaatca
gaggatacaagtagcctctttgataaacttaagaaggaacctgatgctttaactttgctg
gccccagctgctggagacacaatcatatctttagattttggcagcaatgacacagaaact
gaagaccaacaacttgaagaagttccactgtataatgatgtaatgttcccctcatccagt
gagaaattacaaaatattaatctggccatgtctccactacctgcctctgaaactccaaag
ccacttcgaagtagtgctgacccagcactcaatcaagaagttgcattaaaattagagcca
aatccagagtcactggaactttcttttaccatgccccagattcaagatcaaccagccagt
ccttctgatggaagcactagacagagttcacctgagcctaacagtcccagtgaatactgt
tttgacgtggatagtgatatggtcaatgtattcaagttggaattggtggagaaacttttt
gctgaagacacagaagcaaagaatccattttcaactcaggacactgatttagacttggag
atgttggccccctatatcccaatggatgatgatttccagttacgttccttcgatcagctg
tcaccattagaaagcagttcttcaagccctcaaagtgtgagcacaatttcagtattccag
cagactcaaattcaagaacctactattaataccaccactgccaccactgatgaattaaaa
acagtgacaaaagatgatatggaagacattaaaatactgattgcatcttggtctcccacc
catgcacctaaagaaactactagtgccacaacatcttcatataatgatactcaaagtcga
accgcctcaccaaacagagcaggaaaagaagtcatagaacagacagaaaaatctcatcca
agaagccctaacgtggtatctgtcactttgagtcaaagaaatacagttcctgaggaagaa
ttaaatccaaagatattagctttgcagaatgctcagaagaaagcgaaaatggaacaggat
ggttcactttttcaagcagtaggaattggtacactattacagcaaccagatgatcgtgca
actactacatcactttcttggaaacgtgtaaaaggatgcaaatctagtgaacagaatgga
atggagcaaaagacaattattttaataccctctgatttagcatgtagactgctggggcaa
tcaatggatgagagtggattaccacagctgaccagttatgattgtgaagttaacgctcct
atacaaggcagcagaaacctactgcagggtgaagaattactcagagctttggatcaagtt
aactga
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integrated database retrieval system
