Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971411
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Entry
101971411 CDS
T10664
Symbol
Usp9x
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101971411 (Usp9x)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101971411 (Usp9x)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101971411 (Usp9x)
Peptidases and inhibitors [BR:
iti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101971411 (Usp9x)
Ubiquitin system [BR:
iti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101971411 (Usp9x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
101971411
NCBI-ProteinID:
XP_013213481
LinkDB
All DBs
Position
X
Genome browser
AA seq
2559 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQV
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPCESVSSSVQLPEDELFARSPDPRSPKGWLVDLLNKFGTLNGFQILHDR
FINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSSSRFSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLATYMESMRLYARDHEDYDPQTVRLGSRYSHVQEVQ
ERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDI
NKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLW
RVVIQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDG
DKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFVVRFPNQ
GRQVDDLEVWSHTNDTIGSVRRCILNRIKANVAHTKIELFVGGELIDPGDDRKLIGQLNL
KDKSLITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHP
RYISFLWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPS
LDSLFFGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNF
LPNADMETRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPSVEGVNPMTSVNQVTHDQA
VVLQSALQSIPNPSSECMLRNVSVRLAQQISDEASRYMPDICVIRAIQKIIWASGCGALQ
LVFSPNEEITKIYEKTNAGNELDLEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTF
IIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLGSTARERAKHSGDY
FTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDDVKRTGETGVEETILEGHLGVTK
ELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSP
ATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKG
FVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRD
DVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSES
ETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDEE
MKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDELIRYISELAIT
TRPHQIIMPSAIERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNGVYLNPPPGQDHLLP
EAEEITMISIQLAARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFN
VSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDH
LLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPG
PPIKYQYAELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPIQQNV
ADILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRP
YLDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALF
SNCPVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGY
FLERSHSARMTLAKACELCPEEEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQNNHVHG
QPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagtcggagggaatgacaaccagggccaggctcct
gatggacagtctcagccccccctccaacagaatcagacttcgtcgcctgattcttccaat
gaaaattccccggcaactcctccagatgaacaaggtcaaggtgatgccccaccacaggtt
gaagatgaggaacctgcatttccacatactgacttggcaaagttggatgatatgatcaac
aggcctcgatgggtggttcctgttttgccgaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaagaaaggccttgatgttaaaagtgaagcctgtcagcgatttttt
cgagatgggctaacaatatcattcactaaaatccttacagatgaagcagtgagtggatgg
aagtttgaaatacatagatgtattattaacaatactcatcgcctggtggagctatgtgta
gcaaagttgtcccaagactggtttccacttctagaacttcttgccatggccttaaatcct
cattgcaaatttcatatctacaatggtacacgtccatgcgaatcagtttcctcaagtgtt
cagttgcctgaagatgaactcttcgctcgttctccagaccctcgatcaccaaaaggttgg
ctagtggatcttctcaacaaatttggcactttaaatgggttccagatattgcatgatcgt
tttattaatggatcagcattaaatgttcaaataattgcagcccttattaaaccatttgga
caatgctatgagtttcttactcttcatacagtgaaaaagtactttcttccaataatagaa
atggttccacagtttttagaaaacttaactgatgaagaactgaaaaaggaagcaaagaac
gaagccaaaaatgatgccctttcaatgattattaaatctttgaagaatttagcttcaagg
gttccaggacaagaagaaactgtaaaaaacttagaaatatttagattaaaaatgatactt
agattattgcaaatttcttctttcaatggaaagatgaatgcactgaatgaagtcaacaag
gtgatatctagtgtgtcatactatacgcatcggcatggtaatcctgaggaggaagagtgg
ctcacagccgaacgaatggcggaatggatacagcagaacaatattttatccatagtcttg
cgagatagtcttcatcaaccacagtatgtagagaagctggagaagattcttcgttttgtc
atcaaagaaaaagctctgaccttgcaagatcttgataatatctgggcagcacaggcgggg
aaacatgaagccattgtaaagaatgtacatgatctattggcaaaattagcatgggatttt
tctcctgaacaacttgatcatctttttgattgctttaaggccagttggacgaatgctagt
aaaaagcaacgtgaaaagctacttgaactgattcgacgtcttgcagaagatgataaagat
ggtgtgatggcacacaaagtgttgaaccttctgtggaatctggcccacagtgatgatgtg
cctgtagatatcatggacctggccctcagtgcccacataaaaatattggattatagttgc
tcccaggaccgtgacacacaaaagatccagtggatagatcgctttatagaagaacttcgc
acaaatgacaaatgggttattcccgcactgaaacaaattagagaaatttgtagtttgttt
ggtgaagcacctcaaaatttgagttcttctcgtttcagtcaaactcagcgaagtccccat
gtattttatcgccatgatttaatcaatcaactccagcacaatcatgccctagttactttg
gtagctgaaaatcttgcaacttacatggaaagcatgagactatatgctagagaccatgaa
gactatgacccacaaactgtgaggctgggaagtagatatagtcatgttcaagaagtccaa
gaacggcttaacttccttagatttttattgaaggatggccaactgtggctatgtgctcct
caggcaaaacaaatatggaaatgcttagctgagaatgcagtttacctttgtgatcgtgaa
gcctgttttaagtggtattccaaattgatgggggatgaaccagacttagatcctgatatt
aataaggacttctttgaaagtaatgtgcttcagcttgatccttccctattaactgaaaat
ggaatgaaatgttttgagcgattcttcaaagctgtgaattgtcgagaaggaaaactagta
gcaaaaaggagagcctatatgatggatgatttggagttgataggattagactatctttgg
agggttgtgattcagagtaatgatgatattgccagcagagctatagatctactgaaagag
atatacacaaaccttggtccaaggctacaagttaatcaggtggtgatccacgaagacttc
attcagtcttgctttgatcgcttgaaagcttcttatgacacgttgtgtgttttggacggt
gacaaagacagtattaattgtgcaagacaagaagcagttcgaatggttcgagtattaact
gttttaagagaatatataaatgaatgtgacagtgattatcatgaggaaagaacaattcta
cctatgtcaagagctttccgtggcaaacacctctcttttgtagttcgatttccaaaccag
ggcagacaggtagatgacctggaggtatggtctcatacaaatgatacaattggttcagtt
cgacgatgtattctcaatcgcattaaagccaatgtagcccatacaaaaattgagctcttt
gtgggcggtgagctaatagatcctggagatgataggaagttgattggacaattaaacctt
aaagataaatcgctgattacagccaaacttacgcaaataagttccaatatgccttcaagc
cctgatagctcttctgattcctcaactggatctcctggaaatcacggtaaccattacagt
gatggtcccaatccagaagtggaaagttgtttgcccggagtgattatgtcactgcatcct
agatacatctctttcctttggcaagttgcagacttgggtagtagcctaaacatgccacct
cttagagatggagcaagagtgcttatgaaacttatgccaccagatagtacaacaatagaa
aaattaagagctatttgtttagaccacgccaaacttggagagagcagccttagtccatct
ctcgactcgcttttctttggtccttcagcctcacaagtgctatacctaacagaggtggtc
tatgccttgttaatgcctgctggtgcgcctctggctgatgattcctctgattttcagttt
cacttcttgaaaagtggtggcctacccctcgtcctgagtatgctaaccagaaataacttc
ctaccaaatgcagatatggaaactcgaaggggtgcctacctcaatgctcttaaaatagcc
aaactgttgctaactgctattggctatggccatgttcgggcagtggcagaagcttgtcag
ccaagtgtagaaggcgtgaatcctatgacatcggtcaaccaggttactcatgatcaagca
gtggtgctacaaagtgcccttcagagcattcctaacccatcatctgagtgcatgcttaga
aatgtgtcagttcgtcttgctcagcagatatctgatgaggcatcaagatacatgcctgat
atttgtgtcattagagctatacaaaaaatcatctgggcatcaggatgtggggcattacaa
ctagtgtttagcccaaatgaagaaatcactaaaatttatgaaaagaccaatgcaggcaat
gagctggacttggaagatgaacaggtttgctgtgaagcactggaagtgatgacattatgt
tttgccttgattccaacagccttagatgctctcagtaaagaaaaggcttggcagacattc
attattgacttgcttttgcactgtcacagcaaaactgttcgtcaggtggcacaggagcag
ttctttttaatgtgcaccaggtgttgcatgggacacaggcctctacttttcttcattact
ctgctctttaccgttttggggagtaccgccagagagagagctaaacattcaggcgactac
ttcactctcttaaggcatcttcttaattatgcttataacagtaatattaatgtacccaat
gctgaagttcttctcaataatgaaattgattggcttaaaagaattagggatgatgttaaa
agaacaggtgaaacgggtgttgaagagactatcttggaaggccaccttggggtaacaaaa
gagttactggcctttcaaactcctgagaaaaagtttcatattggttgtgaaaaaggaggt
gctaatctcattaaggaactaattgacgatttcatctttcctgcatccaatgtttacctg
caatatatgagaaatggagagctcccagctgagcaggctatcccagtctgtagttcacca
gctacaattaatgctggttttgagttacttgtagcattagctgttggctgtgtgaggaat
ctcaaacagatagtagattctttaactgaaatgtattacattgggacagcaataactact
tgtgaagcacttactgaatgggaatatctgccacctgttggaccccgcccacccaaagga
tttgtggggctgaaaaatgctggtgctacttgttacatgaattctgtgattcagcaactc
tacatgattccttccatcaggaacggtattcttgcaattgaaggcacaggtagtgatgta
gatgatgatatgtctggggatgagaagcaggacaatgagagcaatgttgatcccagggat
gatgtttttggctatcctcaacaatttgaagacaaaccagcattaagtaaaacagaagat
agaaaagaatacaatattggtgtcctaagacaccttcaggtcatctttggtcatttagct
gcttctcgactacaatattatgtgcccagaggattttggaaacagttcaggctttggggc
gagcctgttaatctgcgtgaacaacatgatgctttagaattttttaattcattggtagat
agtttagatgaagctttaaaagccttaggacatccagctatgctaagtaaagtcttagga
gggtcctttgctgatcagaagatttgccaaggctgtccacataggtacgaatgtgaagaa
tcttttacgactctgaatgtagacattagaaatcaccaaaatcttcttgattccttggaa
cagtatgtcaaaggagatttattagaaggtgcaaatgcatatcattgtgaaaaatgcaat
aaaaaggttgataccgtaaagcgcttgctaattaaaaaattacctcctgttcttgctatc
caactaaaacgatttgactatgactgggaaagagaatgtgcaatcaagtttaatgattat
tttgaatttcctcgtgagctggacatggaaccttacacagttgcaggtgttgctaagctg
gaaggagataatgtaaacccagagagtcagctgatacaacagaatgagcagtctgaaagt
gagactgcaggaagcacaaagtataggcttgtgggtgtgcttgtacacagtggtcaagca
agtgggggacattattattcttacatcattcaaaggaatggtggagatggtgagagaaat
cgctggtataaatttgatgatggagatgtaaccgaatgtaaaatggatgacgatgaagaa
atgaaaaatcagtgttttggtggagaatacatgggagaagtgtttgatcacatgatgaag
cgcatgtcatacaggcgccagaaaaggtggtggaatgcttatatacttttctatgaacga
atggacacaatagaccaagacgatgagttgataagatacatatcagagcttgctatcacc
acaagaccccatcaaataataatgccatcagccattgagagaagtgtacggaaacagaat
gtacaattcatgcataaccgaatgcagtacagtttggagtattttcagtttatgaaaaaa
ctgcttacatgtaatggtgtttacttaaaccctcctccagggcaagatcacctgttgcct
gaagcagaagaaatcactatgattagtattcaacttgctgctaggttcctctttactaca
ggatttcacacaaagaaaatagtccgtggctctgccagtgattggtatgatgcattgtgt
attctccttcgccacagcaagaatgtacgtttttggtttgctcataatgtcctttttaat
gtttcaaatcgcttctctgaataccttttggaatgcccaagtgcagaagtgaggggtgca
tttgcaaaacttatagtttttattgcacatttttccttgcaagatgggccatgtccttca
ccttttgcgtctcctggaccttctagtcaggcttatgacaacttaagcttgagcgatcac
ttactacgagcagtactaaatctcttgagaagggaagtttcagagcatggacgtcattta
cagcagtatttcaacttgtttgtaatgtatgccaatttaggtgtggcagaaaagacacag
ctgctcaaactaagtgtacctgctacctttatgcttgtgtctttagatgaagggccaggt
cctccaatcaaatatcagtatgctgaattaggcaaattatactcagtagtgtcacagctg
atccgctgttgcaatgtctcatcaaggatgcagtcttcaataaatggtaatcctcctctt
cccaatccgtttggtgatcccaatttatcacaacctataatgccaattcagcagaatgtg
gcagacattttatttgtgagaacaagttatgtgaagaaaatcattgaagactgcagtaac
tcagaggaaactgtcaaattgcttcgtttttgctgctgggagaatcctcagttctcatct
actgtcctcagtgaacttctctggcaggttgcatattcctacacctatgaacttcggcct
tatttggatctccttctacaaatcttactgattgaggactcctggcagactcacagaatt
cataatgcccttaagggaattccagatgaccgagatgggctgtttgacacaatccagcgc
tctaagaatcactatcagaaaagagcttaccaatgtataaaatgtatggtagctctcttc
agcaattgtcctgttgcttaccaaatcctacagggtaatggcgatctgaaaagaaagtgg
acctgggcagtggaatggcttggagacgaacttgaaagaagaccatatactggcaatcct
cagtacacttacaacaattggtctcccccagtacaaagcaatgaaacatcaaatggctat
ttcttggagagatcacatagcgctaggatgacacttgcaaaagcttgcgaactctgtcca
gaggaggaaccagatgaccaagatgccccagatgagcatgagtcacctccccctgaagat
gccccattatatccccattcacctggatctcagtatcaacagaataaccatgtgcatgga
cagccatatacaggcccagcagcacaccacatgaacaaccctcagagaactggccaacga
gcacaagaaaactacgaaggcagtgaagaagtatccccacctcagaccaaggatcagtga
DBGET
integrated database retrieval system
