KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971426
Entry
101971426         CDS       T10664                                 
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
  KO
K00787  farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00900  Terpenoid backbone biosynthesis
iti01100  Metabolic pathways
iti05164  Influenza A
iti05166  Human T-cell leukemia virus 1 infection
Module
iti_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:iti00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    101971426 (Fdps)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    101971426 (Fdps)
   05164 Influenza A
    101971426 (Fdps)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:iti01006]
    101971426 (Fdps)
Enzymes [BR:iti01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     101971426 (Fdps)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     101971426 (Fdps)
Prenyltransferases [BR:iti01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   101971426 (Fdps)
SSDB
Motif
Pfam: polyprenyl_synt Glyco_hydro_115 TilS-like
Other DBs
NCBI-GeneID: 101971426
NCBI-ProteinID: XP_005331408
LinkDB
Position
Unknown
AA seq 420 aa
MPLSRWLRSVGVFLLPAPCWAPRERFLGYLRRPSLVHGCPVLGAWHSARCWCQVWTEEPR
ALCSSLRMNGDQKSDGYAQEKQDFIQHFSQIVKVLTEDEMGHPETGDAIARLKEVLEYNA
IGGKYNRGLTVVVAFRELADPRKQDADSLQRALTVGWCVELLQAFFLVSDDIMDASLTRR
GQLCWYQKPGIGLDAINDCLLLEACIYRLLKFYCRDQPYYLNLIELFLQSSYQTEIGQTL
DLITAPQGNVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILM
QMGEFFQIQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLQRATPEQRQILQDNYGQK
DAKKVAQVRALYEEMNLPAVFSKYEEDSYIHLMSLIEQCAAPLPPTIFLGLANKIYKRKK
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcccctgtcccgctggctgagatctgtgggggtcttcctgctgccagccccctgctgg
gcgcctagggagaggtttctgggttacctacggcggccctccctggtgcacgggtgccca
gtcctgggggcctggcacagtgcccgctgctggtgccaagtgtggacagaggagcctcga
gcactttgctcctctctcagaatgaacggagaccagaaatcagatggttatgctcaggaa
aagcaggatttcatccagcacttctcccagatagtcaaggtgctgactgaagatgagatg
gggcacccagagacaggagatgctattgctcgactcaaggaggtcctggaatataatgcc
attggaggcaagtacaaccggggtttgacggtggtggtagcattccgggagctggcggat
ccaagaaaacaggatgctgatagtctccagagggccctgacagtgggctggtgtgtggaa
ctgcttcaagctttcttcctggtgtcagatgacatcatggatgcatcccttacccgccgg
ggacagctctgctggtatcagaagccaggcataggtttggatgccatcaatgactgtctg
cttctggaagcatgtatctaccgactgctgaagttctactgccgggatcagccctactat
ttgaacttgattgagctattcctgcagagttcctatcagacggagattgggcagaccctg
gacctcatcacagccccccagggcaatgtggatcttggcagatacactgaaaagaggtac
aaatccattgtcaagtacaagacagctttctactccttctacctgcctatcgctgctgcc
atgtacatggcaggcattgatggggagaaggaacatgctaatgccaagaagatcctgatg
cagatgggagagttcttccagattcaggatgattaccttgacctctttggcgaccccagt
gtgacgggaaaagttggcactgacatccaggacaacaagtgcagctggctggtggttcag
tgtctgcaacgggccactccagaacagcgccagatcttgcaggacaattatgggcagaag
gacgccaagaaggtggcccaggtgagggcactgtacgaggagatgaatctaccagctgtt
ttctccaagtatgaagaagacagttacatccaccttatgagtctcattgagcagtgtgct
gcgcctctgccccccaccatcttcctggggctggccaacaagatctacaagcggaaaaag
tga

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