Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971507
Help
Entry
101971507 CDS
T10664
Symbol
Rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101971507 (Rffl)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
101971507 (Rffl)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
101971507 (Rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
SAP
FYVE
Prok-RING_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
101971507
NCBI-ProteinID:
XP_013215253
UniProt:
A0A287CZ85
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MISSEHGSSNLGGRNWRQLAVCRGSILKQEKSDFIMWATCCNWFCLDGQPEEVPPAPGAR
TQAYSNPGYSSFPSPTGLEPSCKACGAHFANTARKQTCLDCKKNFCMTCSSQEGNGPRLC
LLCQRFRATAFQREELMKMKVKDLRDYLSLHDISTEMCREKEELVFLVLGQQPVISEEDR
THVPTLSPDFPEQQAFLTQPHASTVPPTSPSLPSSPAQATSVPPAQESQQANGHVSQDQE
EPVYLESTARAPTEDETQSIDSEDSFVPGRRASLSDLTHLEDIEGLTVRQLKEILARNFV
NYKGCCEKWELMERVTRLYKDQKGLQHLVCGAEDQNGGAMPSGLEENLCKICMDSPIDCV
LLECGHMVTCTKCGKRMNECPICRQYVIRAVHVFRS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatctcatctgaacatggctccagcaaccttggtggcaggaattggaggcagcttgct
gtgtgccgtggcagtattttgaaacaggaaaaatcagattttatcatgtgggcaacctgc
tgcaactggttctgcctggatggacagcctgaggaggtcccaccagcccccggagccagg
acacaagcctattccaaccctgggtacagctccttcccatccccaacaggcttggaacca
agctgcaaggcctgtggggcccactttgcaaacacagccaggaagcagacctgtttggac
tgtaagaaaaatttctgcatgacctgttcaagccaagaggggaatgggccccgcctctgc
cttctctgccaacggttccgagccacagcctttcagcgggaggagctcatgaagatgaag
gtgaaggacctgagggactacctcagcctccatgacatctctactgaaatgtgccgggag
aaagaagagctggtattcttggtgcttggccagcagcctgtaatctccgaggaggacagg
actcatgtcccaaccttgtccccggactttcctgagcagcaggccttcctgacccagcct
catgccagcacagtacctcctacctcacctagcctcccttcttcacctgcacaagccacc
tctgttcctcctgctcaggaaagtcagcaggccaatggccatgtgtctcaggaccaagag
gagcctgtctacctggagagcacagccagagcacctaccgaggatgagacccagtccatt
gactctgaggacagctttgtcccaggccggcgggcctctctgtctgacctgacccacctg
gaagacattgaaggcctgacggtgcggcagctgaaagagatcctggctcgcaactttgtc
aactacaagggctgctgtgagaagtgggagctgatggagagagtgacacggctgtacaag
gatcagaaaggactccagcacttggtgtgtggtgctgaggaccaaaacgggggagcaatg
ccgtctggactggaggagaacctgtgtaagatctgcatggactcacccattgactgtgtt
ctgctggagtgtggccacatggtaacctgtaccaaatgtggcaagcgcatgaatgaatgt
cccatctgccggcagtatgtgatccgagctgttcacgtcttccggtcctaa
DBGET
integrated database retrieval system
