Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971759
Help
Entry
101971759 CDS
T10664
Symbol
Taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101971759 (Taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iti03021
]
101971759 (Taf5l)
03036 Chromosome and associated proteins [BR:
iti03036
]
101971759 (Taf5l)
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101971759 (Taf5l)
Coactivators
SAGA/TFTC/STAGA complex
101971759 (Taf5l)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101971759 (Taf5l)
STAGA complex
101971759 (Taf5l)
TFTC complex
101971759 (Taf5l)
SAGA complex
101971759 (Taf5l)
SLIK complex
101971759 (Taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR19_1st
PROPPIN
PEP5_VPS11_N
Ge1_WD40
Nbas_N
WD_LRWD1
Beta-prop_DCAF12
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
101971759
NCBI-ProteinID:
XP_013211803
UniProt:
I3N1P8
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MKVMKRVRTEQLQTAVSCYLKRRQYVDSDGPLKQSLRLSQSAEEMAANLSVQSESGCANI
VSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVE
SFYSRFHGMFLQNAGQKEVIEQLQTTRTVQDVLSDSRLRAFLDNKYVVRLPEDSYNYLVR
YLQSDNNTALCRVLAVHIHLDVQPAKRTDYQLYASGGPRGESGSLEPPDVPSPLLQNEAA
LEVLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEVSPDSRLLAAGFDNSCIKLWSLR
SKKLKAEPHQVDTSRIRLACDTLEEEDTEDEGMGTEMKTLRGHCGPVYSTRFLADGSGLL
SCSEDMSIRYWDLGSFSNTVLYQGHAYPVWDLDVSPYSLYFASGSHDRTARLWSLDRTYP
LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLAVAFSP
NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWD
IRSACGSAPADGSSSELVGVYTGPMSSVLGVQFMACNLLLVTGITQENQEH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcatgaaacgtgtgcgcacggagcagctccagacggcagtgtcctgctacctc
aaacgccggcagtacgtggactccgatggccccctgaagcaaagcctgcgactgtcacag
agtgcagaggagatggcggccaacctctcagtccagtctgaatctggttgtgccaacata
gtgtctgcagccccttgccaggcagagccccagcagtatgaagtacagttcggacggctg
aggaattttctcactgattctgattcccagcacagccatgaagtgatgcccctcctctac
cccctcttcgtctacctccatctcaacctggtccagaacagccctaagagcacggtggag
agtttctacagccgctttcatgggatgttcctacagaacgcaggccagaaagaggttatt
gagcaactgcagaccacacggacggtccaggacgtcctgtccgactccaggctccgcgca
ttcctagacaacaagtacgtggtccgcctgccggaagacagctacaactacctggtgcgc
tacctccagagtgacaacaacaccgcactgtgcagggtgctggccgtccacatccacctg
gatgtgcaacctgccaagaggacagactaccagctctacgccagtggcggcccccgtggt
gagagcggtagcctggagcccccagatgtgcccagccctctcttacagaatgaggccgcc
ctagaggtcctgcaggacagcatcaagcgtgtgaaggacgggcctccctccctcaccacc
atctgcttctatgccttctacaacacggagcaactgctcaacaccgctgaggtctccccc
gacagcaggctgctagctgccgggtttgacaactcctgcatcaagctctggagtctgcgg
tccaagaagttgaaggcggagccccaccaggtggacacatctcgtatccgcctggcttgt
gacactctggaggaggaggacactgaggacgagggcatgggcacagagatgaagacgctg
cggggccactgcggacctgtatacagcacgcgcttcctcgcagatggctcagggctgctc
tcttgctctgaagatatgtccatccgatactgggacctgggcagcttcagcaacactgtg
ctgtaccaagggcatgcctacccagtgtgggacttagacgtcagcccctacagcctgtac
tttgccagtgggtcccacgaccgcaccgccaggctgtggtcactggatcggacgtacccc
ctgaggatatacgcaggtcacctggcagatgtggactgtgtcaagttccacccaaactcc
aactacctggccacaggctcgaccgacaaaactgtccggctatggagcgcccagcagggg
aactctgtgcggctcttcacaggccaccgcgggcccgtgctggctgttgccttctctccc
aatgggaagtacttggcctccgcaggcgaggaccagcggttgaagctgtgggacttggcc
tctgggaccctcttcaaggagctgagaggccacacagacagcatcaccagcctcgccttc
agcccagacagcggcctggtggcctctgcctccatggacaactctgtgcgcgtctgggac
atcaggagcgcctgcggcagtgcgcctgccgacggctcctccagtgagctggtgggtgtg
tacacggggcccatgagcagtgtcctgggtgtgcagttcatggcctgcaacctcctcctg
gtgacggggatcacacaggaaaatcaggagcattag
DBGET
integrated database retrieval system
