Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971816
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Entry
101971816 CDS
T10664
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04382
Cornified envelope formation
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti05145
Toxoplasmosis
iti05146
Amoebiasis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101971816
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101971816
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101971816
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101971816
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101971816
09162 Cancer: specific types
05222 Small cell lung cancer
101971816
09172 Infectious disease: viral
05165 Human papillomavirus infection
101971816
09174 Infectious disease: parasitic
05146 Amoebiasis
101971816
05145 Toxoplasmosis
101971816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_I
Laminin_N
Laminin_II
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
101971816
NCBI-ProteinID:
XP_040130280
LinkDB
All DBs
Position
Unknown
AA seq
2454 aa
AA seq
DB search
MAAAARAPDWTSLPVLRSPRSLLVLVLVLRVPSAWSATARDPAEELSLHPPYFNLAEAAK
IWATATCGERGPGGGQPRPELYCKLVGGPNVPGRGHTIQGQFCDYCNSEDSRRAHPATNA
IDGSERWWQSPPLSSGTQYNKVNLTLDLGQLFHVAYILIKFANSPRPDLWVLERSVDFGN
TYSPWQYFAHSKRDCLEQFGQQANKAITRDDDVLCITEFSRIVPLENGEVVVSLINGRPG
AKNFTFSHTLREFTKATNIRLRFLRTNTLLGHLISKAQRDPTVTRRYYYSIKDISIGGRC
VCNGHAEVCNADNPEKRFRCECQHHTCGETCSHCCVGYNQRRWQPALWEQNNECEACNCH
GHAIDCYYDPDVEQQQASLNTQGIYAGGGVCIDCQHNTAGVNCEKCAKGYYRPYGVPIDA
PHGCIPCSCNPEHADDCEQGSGHCHCKPNFHGDYCEKCAAGYYNFPFCLRIPASPVSTPS
LEDPEAGNIEGCDCNLEGVLPEICDDLGRCLCRPGVEGPGCDTCRSGSYSFPICQACQCS
ALGSYPTPCHPVTGQCECLPGITGQRCDRCLSGAYDFPYCQGSSGACDPAGTIDSSLGYC
QCKLHVESPTCSICKPLYWNLARENPSGCSECQCHEAGTVSGVGECGQGDGDCHCKVHVS
GDACDTCEDGYFALEKRNYFGCQGCQCDIGGALTSVCSGHSGACQCREHVVGKACQRPEN
NYYFPNLHHMKYEIEDGTVPNGRDLRFGFDPLAFPGFSWRGYAQMTSVQNEVRVMLDMGK
PNLSLFHIILRYVNPGTEAISGHITIYPSWVKSGAAQSKEITFLPSKEPAFVTIPGKGIA
DQFSLTPGTWIACIKAEGVLLDYLVLLPRDYFEASVLQLPVTEPCAHTGPPQENCLLYQH
LPVTRFPCTLACEARHFLLDGQSRPLAVRQPTAAHPVMVDLSGREVELHLQLRVPQVGQY
VVMVEYVTEADQLFTVDVNMKSPGGPVLAGQVTIYSCKYSVLCRSIVIDSMSRIAVYELL
ADADLQLKVHMARFLLHQICLIPIEEFSAEYLRPQVHCIASYGPLVNQSATCVSLTHETP
PTALILDVPSGRPFSLLPQENSPSANVIPGITLQAPQSQVTLRGLVPHLGRYVFVIHFYQ
AAHPTFPVQVFVDGGRLWSGSFRASFCPHVLGCRDQVISGGQVEFDISEPEVAVTVKVPE
GKSLTLVRVLVVPAENYDYQILNKKSVDKSFEFITNCGGNSFYIDPQTASRFCKNSARSL
VAFYHNGALPCECDPAGAISHHCNPEGGQCPCRPNIIGRQCTRCATGHYGFPQCKQCNCG
RRLCEEVTGQCLCPPRTVRPQCEACELHSFSFHPLAGCQGCNCSKRGIIGAAAPDCDKDS
GQCRCKPRITGRQCDQCTSGFYHFPECVPCNCNRDGTEPGVCDPGTGACLCKANVEGTEC
NMCREGFFYLDPANPKGCTTCFCFGVTSSCHSTHKQRAKFVDMMGWHLETADRVDVPVSF
NPGSNSVVADLQELPSTVHSASWIAPPSYLGDKVSSYGGFLTYQVKSFGLPGDMVLLEKK
PDVQLTGQHMSIIHEESSDPRPDRLYHGRVQMVEGNFRHASSRAPVSREELMTVLSRLQG
LHIRGLHFTETQRLTLGEVGLEEASDTGSGRRAHEVEMCTCPPDYMGDSCQGCSPGYYRD
NKGSLTGRCVPCNCNGHSNRCQDGSGICINCQHNTAGDHCERCKEGHYGNAVHGSCRVCP
CPHTNSFATGCVVSGANVRCACKPGYAGAQCERCAPGYFGNPQKFGGNCRPCNCNSNGQL
HSCDPLTGDCLNQEPKDSGPAEECDDCDSCVMTLLNDLATMGEELRLAKSQLQGLSASAS
TLEQIRLVETQAKDLRNQLLNYRSTVSNHGSKMDALEKELSNLNPEFETLQEKARINSRK
AQTLYNNVDRTIQSAEDLNTKIKNVIRNVHILLKQISGTGGDGNHLPLGDFSRELAEAHR
MMRELRDRNFAKHLREAEAEKRAAQLLLDQKRQQALKLENNGLIKNIQNSLSDYEAKLHD
LRAVLQEAAAQTKQATDLNQDNERALGTFKNQVKEIDLLKSDFTKLLSTADSSLLQTNTV
LQQMDKKQKEYEKLVSTLNARRQELSDKVRELSRSASKTSLVVQAEKHAQSLQELAKQLE
EIKRNASGDELVRRAVDAATAYENILNAINAAEDAANKATSASESALQTVIKENLPGKAK
TLSSDSDKLLHKAKLTQKELQQEINPALNNLQQTLNVVTVQKKLIDTNLTTVRDDLRGIQ
RGDIDDMISGAKGLVRKADDITSEVLDGLNPIQTDLERIKDTYGSTQSADFNQALSDAHN
SVKKLTKKLPDLLSKIESINQQLLPLGNISDNMDRIRELIQQARDAANKVAVPMRFNGKS
GVEVRLPNDLEDLKGYTSLSLFLQRPDSRENGGTENMFVMYLGNKDKEERYVHS
NT seq
7365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcgcgggctccagactggacatcgctgccagtcctgcggtcgccacgg
tcgctgcttgtgcttgtgctggtgctgcgggtgccatcagcctggagtgcgacagctcgg
gaccccgccgaggagctcagcctgcatccgccctacttcaacctggccgaggcggcgaag
atttgggccactgctacctgcggggaacggggacccggcggagggcagccccggccagag
ctctactgcaagttggttgggggccccaacgtcccgggcagaggccacaccatccagggt
cagttttgtgactattgtaattctgaagattctagaagagcacatccagccaccaatgca
attgatggatccgaacgttggtggcaaagccctcctctgtcctcaggcacacagtacaac
aaagtcaacctcaccctggatctgggtcagctcttccatgtggcctatattttaatcaaa
tttgcaaattctcctcgccctgatctttgggtcttggaaaggtctgtagactttggaaac
acctactcaccatggcagtattttgctcattctaaaagagactgtttggaacaatttggg
cagcaggcaaataaagctatcacccgggatgatgacgtactctgtattactgaattttcc
cgcattgtacctttggaaaatggtgaggtggtggtgtccttgataaatggtcgtccaggt
gcaaaaaattttactttctcccacaccctccgggagttcactaaggcaacaaacatccgc
ttgcgctttcttcgaaccaacaccctgcttggacatctcatctccaaagcacagcgggat
ccaactgtcactcggaggtattattacagcataaaggatatcagcatcggtgggcggtgt
gtttgcaatggccacgctgaagtgtgcaatgcagataatcctgaaaaacggttccggtgt
gaatgccagcaccacacctgtggggagacctgcagtcactgctgtgtgggctacaatcag
aggcgctggcagccggcactgtgggagcagaacaatgagtgtgaagcctgcaactgtcac
ggccatgccatcgactgttactatgacccagatgttgagcagcagcaagcaagcttgaat
acccaaggcatctatgcaggtggcggggtctgcatcgactgccagcacaacacagctggg
gtgaactgtgaaaagtgtgccaagggttattaccgtccttatggggttccaatcgatgcc
ccccatggctgcatcccttgcagctgcaaccctgagcatgcagatgactgtgagcagggc
tcaggccactgtcattgcaaaccaaatttccatggagactactgtgagaagtgtgccgct
ggttactataacttcccattttgcttgagaatccctgcttctcctgtttctactccaagt
ctagaagatccagaagctggaaatatagaagggtgtgactgtaacttggaaggtgttctc
cctgaaatttgcgatgaccttggaaggtgtctgtgccgtcctggggtcgagggcccgggg
tgtgacacctgccgctctggttcctactcgttccctatttgccaagcctgccagtgctca
gcccttggatcctacccaacgccttgccacccggtgactggacagtgtgaatgcttgcca
gggataacaggacagcggtgtgacagatgtctctcaggagcctatgacttcccctactgt
caaggttccagtggtgcttgtgacccagctggtaccatcgactccagcttggggtattgc
caatgcaagcttcatgtggaaagtcctacttgtagtatctgcaaaccattatattggaat
ctggccagagaaaatcccagtggatgttcagagtgccagtgccatgaggcaggaacagtg
agtggagttggagagtgtgggcagggagacggtgactgtcactgcaaggtccatgtgagc
ggtgatgcctgtgatacctgtgaagacggatatttcgctctggaaaagagaaactacttt
gggtgtcaagggtgtcagtgtgacattggcggggcactcacatctgtgtgcagcgggcac
tctggagcatgccaatgccgagagcatgtggtggggaaggcgtgccagaggcctgaaaat
aactactatttcccaaatttgcatcatatgaagtatgagattgaggatggcactgtacct
aatggaagagaccttcggtttggatttgatcccctggcatttcctgggtttagctggaga
ggatatgcccagatgacctcagtacagaatgaagtaagggtgatgttggatatggggaag
ccaaatctctccttgtttcacattattctgagatatgtaaaccctggaactgaagccatt
tctggccatataaccatttatccatcttgggtgaagtcaggtgctgctcaaagcaaagag
atcaccttcctgccgagcaaggagccagcttttgtcaccatccctggaaaaggcattgca
gaccagttctcattgacaccggggacatggattgcttgtatcaaggcagaaggagtcctc
ttggattacctggtgctgctccccagagactactttgaagcttcggtgttgcagctgcct
gtcacagaaccatgtgcccacacaggacctccccaggaaaattgcttgctttaccagcat
ttgccagtgaccaggttcccctgcaccctggcttgcgaggccaggcacttcctgctcgat
ggccagtcgagacccttggcagtgagacagcccaccgcagcacatccagtcatggtggac
ctcagcgggagagaggtggaactgcatctgcagctgcgtgtcccacaggtcggccagtat
gtggtcatggttgaatatgtcacagaagcagaccagctgtttacagttgacgtgaacatg
aagagccctgggggccctgttttggcaggccaggtgaccatatatagctgcaagtacagt
gttctctgccggagcattgtgatcgatagcatgagccgcattgctgtgtatgagctattg
gcagatgcagaccttcagctcaaggtgcacatggcccgattccttctgcatcagatttgt
ctcatacccattgaagaattctcagctgaatacttgaggcctcaagtccactgtattgcc
agctacgggccattggttaatcaaagtgccacctgtgtctccctgactcatgagactcct
cccacagcgttaattttggatgtccccagtgggagaccattttctctcctgccccaggag
aattctccttctgcaaatgtcatacctggaattaccttacaggccccacagagccaagtg
accctgagaggactcgtaccacacctgggccgctatgtttttgtcatccatttttatcaa
gcagcgcacccaacgtttcccgtccaggtgtttgtggatggagggcggctgtggtcaggt
tccttccgtgcctccttttgtccccatgtgctgggctgccgggatcaagtgatcagtgga
ggccaggttgagtttgacatctcagagcctgaggtggctgtgactgtgaaggttccggaa
ggaaagtccttaacattggtccgcgttctagtggtgcctgcagagaattacgactatcaa
atacttaacaaaaaatcggtggacaagtcctttgagtttatcaccaattgtggaggaaac
agtttttatattgatccccagacagcctccagattctgtaagaattctgccaggtccttg
gtggccttttaccataatggcgctctgccttgtgaatgtgaccctgctggggccatcagc
caccactgcaatcctgagggcgggcagtgcccgtgcaggcccaacatcatcgggcggcag
tgtacccgctgtgcaactggccactatggattcccacaatgcaagcagtgcaactgtggc
aggcggctttgtgaagaggtgaccgggcagtgcctctgccctccccgcactgtcagaccc
cagtgtgaggcctgcgagctgcattccttcagcttccaccccctagccggttgccaaggc
tgcaactgctctaagaggggcatcattggggctgctgccccagattgcgataaggacagt
ggacaatgcaggtgcaagcccaggatcaccgggcggcagtgtgaccagtgtacttctggg
ttctaccattttcctgagtgtgttccctgcaattgcaacagagatgggactgagccagga
gtgtgtgacccggggactggggcttgcctctgcaaggcaaatgtggaaggtacagaatgt
aacatgtgtcgagaaggattcttctatctggatccagccaatcccaagggttgcaccacc
tgcttctgttttggagtgaccagtagttgtcacagtacacataagcaaagagctaagttt
gtggatatgatgggatggcacctggagacagcagatcgagtggatgtccctgtttcattc
aacccaggtagcaacagtgtcgtggcagatctccaggagcttccctcaacagtgcacagt
gcatcttggatcgcgcctccatcttacctgggggacaaggtttcttcatatggtggcttc
ctcacttatcaagtcaagtcatttggcttacctggtgacatggttcttctggaaaaaaag
ccagatgtgcagctcactggtcagcacatgtccatcatccatgaggagtcaagtgacccc
cggccagatcgactgtatcatgggagagtgcagatggttgagggaaacttcagacacgcc
agcagcagagccccagtgtccagggaagagctgatgacggtcctgtctagactccagggg
ctgcacatccggggcctccacttcaccgagacacagaggctcacactgggtgaggtgggg
ctggaggaggcctccgacacaggaagtggacgcagagcacacgaagtggagatgtgtacc
tgtccccctgactatatgggtgactcatgtcagggttgtagccctggatactatcgggat
aacaaaggctcgcttaccggacgatgtgttccctgcaattgcaacggacattcaaatcga
tgccaggatggctccggcatatgtattaactgtcagcataacacggctggagatcactgt
gaacgctgcaaggagggtcactatgggaacgctgtccatggatcctgtagggtctgcccg
tgtcctcataccaacagttttgccactggctgtgtcgtgagcggggccaacgtgaggtgc
gcctgcaaacccggctacgcaggagcacagtgcgagagatgtgcaccaggatattttggg
aatccccagaagtttggaggtaactgccgaccatgcaattgtaacagcaatggccagtta
cattcttgtgaccccctaactggagactgcctcaaccaagaacccaaagatagtggccct
gcagaagaatgtgatgattgtgacagctgtgttatgacgctcctgaatgacctggccacc
atgggtgaggagctccgtctggccaagtctcagctacaaggcctgagtgccagtgccagc
accctggagcagattcggctcgtggagacccaagccaaggacctgaggaatcagttgctc
aactatcgttctactgtttcaaatcatggatcaaaaatggatgccctggaaaaagagctg
agtaacttgaatcctgaattcgaaactttgcaagaaaaggctcgaataaattccaggaaa
gcacaaacattatataacaatgttgatcggacgatccaaagtgcagaagacctgaacaca
aagattaaaaatgtcatccggaatgtgcacattctcctcaagcagatctctgggacaggt
ggagatggaaaccacttgcctttgggcgacttctccagagagttggcagaagcccatcgc
atgatgagggaactgcgggaccgaaactttgcaaagcacctgagagaggcagaagctgaa
aaaagagccgcccagctcttgttggaccagaaaaggcagcaagccctgaagctggagaac
aatggacttataaagaacatacagaattctttaagtgattatgaagccaaactccatgac
ctgcgtgctgtgctacaggaggcagccgcccagacaaagcaggccactgatctcaaccaa
gacaatgagcgagctttgggaacctttaagaatcaagtaaaagaaattgatttgctgaag
agtgatttcacaaagctcctgtctactgcagactcttccttgcttcagaccaacactgta
ctacagcagatggacaaaaaacagaaggaatatgaaaaattagtttctactttaaatgca
agaagacaggaactaagtgacaaagtgagagaactctccagatcagcgagcaagacatcc
ctggtagtgcaggcagaaaagcatgcacagtctttacaagaactggccaagcagctggaa
gagatcaaaagaaatgccagtggggatgagctggtacgccgtgctgtggatgctgccacc
gcctacgagaacatcctcaatgccatcaatgcagcagaggatgctgcaaacaaggccacc
agtgcctctgagtcagccctccagacagtgataaaggaaaatcttcccggaaaagctaag
accctgagttctgacagtgataagctgctgcacaaagccaagttaacacagaaagagctg
cagcaagaaatcaatccagctctcaacaacctacagcaaaccctgaatgtggtgacagtt
cagaaaaaactgatagacaccaatctcactactgtccgtgacgaccttcgtgggatacag
agaggtgacatcgatgacatgattagcggtgcaaagggcctggtcagaaaggctgacgac
atcacaagtgaggttctggatgggcttaaccccattcagacagacttggaaagaattaag
gatacttatgggagcacacagagtgcagacttcaaccaggctctgagtgatgcacataac
tcagtaaagaaattaactaagaaacttccagatcttttgagcaagattgaaagtatcaac
caacaactgttacccttgggaaacatctctgacaatatggaccgaattcgggaactaatt
cagcaggccagagatgctgcaaataaggtcgcagtccccatgagattcaatggtaaatct
ggcgttgaagtccgacttccaaatgacctggaagatttgaaaggatacacatctctctct
ttgtttcttcaaagacctgactcaagagaaaatggggggactgagaatatgtttgtgatg
tacctcggaaataaagataaggaggaaagatacgtacatagctga
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integrated database retrieval system
