Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971819
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Entry
101971819 CDS
T10664
Symbol
Lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04382
Cornified envelope formation
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti05145
Toxoplasmosis
iti05146
Amoebiasis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101971819 (Lamb3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101971819 (Lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101971819 (Lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101971819 (Lamb3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101971819 (Lamb3)
09162 Cancer: specific types
05222 Small cell lung cancer
101971819 (Lamb3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101971819 (Lamb3)
09174 Infectious disease: parasitic
05146 Amoebiasis
101971819 (Lamb3)
05145 Toxoplasmosis
101971819 (Lamb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
LAMB1
EGF_LMN_ATRN
Laminin_II
GCV_T
DUF745
BNR_6
ATG16
NPV_P10
Motif
Other DBs
NCBI-GeneID:
101971819
NCBI-ProteinID:
XP_005329522
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MMRLFLFLCFALPSFLRAQQACSRGACYPPVGDLLIGRTRFLRASSTCGLTKPETYCTQY
GEWQLKCCKCDSRLPHNYNSHRVENVVSSSGPMRWWQSQNDVSPVSLQLDLDRRLQLHDI
TMDFKGPLPAGMLIERSSDFGKTWRVYQYLAADCTSAFPRVRQGQPQSWQDARCQPLPQR
PNGHLNGGKVQLNLMDLASGIPATQSQKIQELGDITNLRVNFTRLAPMPQRGFYPPSAYF
AVSQLRLQGSCFCHGHADHCAPKPAAPESPSSAVQVHDVCVCQHNTAGPNCERCAPFYNN
RPWRPAETQNPHECQRCDCNGHSETCHFDPSVFAASQGAHGGVCDNCRDHTEGKNCERCQ
LHYFRNRRPGAPIQETCIPCECDPDGAVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTG
LTYTNPQGCHRCDCSILGSQRDMPCDEESGRCLCLPNVVGPKCDQCAPYHWKLASGRGCE
PCACDPHNSLSPQCNQFTGQCPCREGFSGLKCSAAALIRQCPDRTYGDVATGCRACDCDF
RGTENLGCDKASGRCLCRPGLTGRRCDQCQRGYCDRYPVCVGCHPCFQTYDSDLKEQARR
LHSLRNATAGLRPGPGLDDLGLASRVRDAKAKIEQIQAILGSSLVTEQDVAQVANAVFSI
RQTLQDLQLDLPLLEEMLSLPGDLDSLDRSFNHLLVMYQNKREQFEKISNVDLSGAFRML
TTAYERSSQAARQISDSSRLLHRLREDRRRAEGLDRLVGRGEGDGSPDLASLQLEMASLP
DLTPTINKLCGGSRQTACTPGACPGELCPQDNGTVCGSHCRGARPRAGGAFRMAGQVAEQ
LRGFNSQLQQTRQMIRAAEEAASQVQSDAQRLKTQVSTSHSQMEEDIGRTRFLIQQVRDF
LTDPDMDAATIQEVSEAVLALWLPTDSATVLQKMNEIQAIAARLPNVDLVLSQTKQDITR
ARRLQTEAEQARSRAHAVEGQVEDVVGNLRQGTVALQEAQDTMQGTSRSLKLIQDRVAEV
QQVLGPAERLVMGMREQLGDFRARMEELHRQAQQQRAQAAQAQQLAEGASQRALSAQENF
ERIKQKYAGLKDRLSRSPMLGEQGSRILTVKTEAEELFEETMEMMDRMQDMESELLQGSQ
AIMLRSADLTGLEKRVEQIRDHINGRVLYYATCK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgttccttttcctgtgttttgccttgcccagcttcctgcgtgcccaacaa
gcctgctcccgtggggcctgctacccacctgttggggatttgctcattggaaggacccgg
tttctccgagcttcatctacctgtggactgaccaagcctgagacctactgcacacagtat
ggagagtggcaactgaaatgctgcaagtgtgactccaggctgcctcacaactacaatagt
caccgagtggagaatgtggtctcatcctctggccccatgcgctggtggcagtcccagaat
gatgtgagccctgtctctctgcagctggacttggacaggagactgcagcttcatgacatc
acaatggattttaaggggcctctgccagcaggcatgctgattgagcgctcctcagacttt
ggcaagacctggcgggtgtaccagtacctggctgcggactgcacctctgccttcccccgg
gtccgccagggccagccccagagttggcaagatgcccggtgccagcccctgccccagaga
cctaatggacacctaaatgggggaaaggttcaacttaaccttatggatttagcgtctggg
attccagcaactcaaagtcaaaaaattcaagagttgggagacatcacaaacttgagagtc
aacttcaccaggctggccccaatgccccagaggggtttctatccccccagcgcctacttt
gcagtgtcccagctgcgtctgcaggggagctgcttctgtcacggccacgctgaccactgt
gcacccaagcctgcagcccctgaaagtccctcctcagctgtgcaggtccatgatgtctgt
gtctgccagcacaacactgctggccccaactgtgaacgctgtgcccccttctataacaac
cggccctggagacctgcagagacccaaaacccccatgaatgtcaaagatgtgattgcaat
gggcattcagagacatgtcactttgacccatctgtatttgctgccagccaaggggcacat
ggaggagtgtgtgacaattgccgggaccacactgagggcaagaactgtgagcggtgtcag
ctgcactatttccggaaccggcgaccaggcgcccctattcaagagacctgtattccttgt
gaatgtgatccggatggggcagtgccaggggctccctgtgacccagtcaccgggcaatgt
gtgtgcaaagaacatgtgcagggagagcgctgtgacctttgcaagccaggcttcacagga
ctcacctacaccaacccacagggatgccaccgttgtgactgcagcatcctggggtcccag
cgggacatgccctgtgatgaggagagtggccgctgcctgtgtctgcccaacgtggtgggt
cccaaatgtgaccagtgcgctccctaccactggaagctggccagtggccggggctgcgag
ccatgtgcctgtgacccgcacaactccctcagcccccagtgcaaccagttcacagggcag
tgcccctgtcgggaaggctttagtggcctcaagtgcagtgctgccgcactcatccgccag
tgtccagaccggacctatggagatgtggccacaggatgccgagcctgtgactgtgacttc
cgaggaacagagaatctgggctgcgacaaggcctcgggccgctgtctctgccgccctggc
ttgaccggacgtcgctgtgaccagtgccagcgaggttactgtgaccgctaccccgtgtgc
gtgggctgccacccatgcttccagacctacgactcagacctcaaggagcaggctcggcgc
ctccacagtctccgcaatgccactgctggcctgcggccggggccaggcctggacgacctt
ggcctggcctccagggtgcgggatgccaaggccaagattgagcagatccaagcaattttg
ggcagttccttggtcacagagcaggatgtggcccaggtggccaatgccgtcttctctatc
aggcagactctccaggacctgcagttggatcttcccctgctggaggagatgttgtccctc
ccaggagacttggacagtctggacagaagcttcaatcacctccttgttatgtatcagaac
aagagggaacagtttgaaaaaataagcaatgttgatctttcaggagccttccggatgctg
accacagcctatgagcggtcatcgcaggctgctcggcagatctcggacagctccaggttg
ctgcaccggctcagggaggaccgcagacgagcagaggggctggacaggctggtgggaaga
ggtgaaggtgatggtagccccgatctggcatccctgcagctagagatggcctccttgcct
gatctgacacctaccatcaataagctctgtggcggctccaggcagacggcttgcacccca
ggagcgtgtcctggtgaactgtgtccccaagataatggcactgtctgtggctcccactgc
aggggtgcccgccctagggctggaggggccttccggatggcagggcaggtggctgagcag
ctccggggtttcaactcccagctccagcagaccaggcagatgattagggcagctgaggaa
gctgcctcgcaggtccaatcagatgctcagcgcctaaagacccaggtgagcaccagtcac
tcccagatggaagaagacattggacgcacacggttcctcatccagcaggtccgggacttc
ctcacggaccctgatatggatgcagccaccatccaggaggtcagcgaggctgtgctggct
ctgtggctgcccacggactcggctacagtcctgcagaagatgaacgagatccaggccatc
gcagccaggctccccaacgtggacctggtgctgtctcagaccaagcaggacattacgcgg
gcccgcaggctccagactgaggctgagcaggccaggagccgagctcacgcagtggaaggc
caggtggaggatgtggttgggaacctgcggcagggcacggtggcattgcaggaggcccag
gacaccatgcaaggcaccagccgctcccttaaacttatccaggacagggtcgctgaggtt
cagcaggtcctgggaccagcagaaaggctggtgatgggcatgagggagcagctgggtgac
ttccgagcacggatggaggagctccaccgccaggcccagcagcagagggcacaggcagcc
caggcccagcagcttgcagagggtgccagccagcgggcactgagtgcccaggagaacttt
gagagaataaagcaaaagtatgctgggttgaaggaccgtttgagtcggagtcccatgctg
ggtgagcagggcagtcggatcctgactgtcaagacagaggcagaggaactgtttgaggag
accatggagatgatggacaggatgcaagacatggaatcggagctgctgcaggggagccag
gccatcatgctgcgctcagcagacctgacaggactggagaagcgcgtggagcagatccgc
gatcacatcaatgggcgtgtgctctattatgccacctgcaaatga
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