Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971844
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Entry
101971844 CDS
T10664
Symbol
Mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00450
Selenocompound metabolism
iti00970
Aminoacyl-tRNA biosynthesis
iti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
101971844 (Mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101971844 (Mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
iti01007
]
101971844 (Mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101971844 (Mars1)
Enzymes [BR:
iti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
101971844 (Mars1)
Amino acid related enzymes [BR:
iti01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101971844 (Mars1)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101971844 (Mars1)
Prokaryotic type
Other AARSs
101971844 (Mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_2
GST_C
Anticodon_1
GST_N_2
GST_C_3
GST_N
Motif
Other DBs
NCBI-GeneID:
101971844
NCBI-ProteinID:
XP_005335733
UniProt:
I3LY12
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MRLFVSEGAPGSLPVLAAAGRARGRATELLISTVGPEECVVPFLTRPKVPVLQLDSGNYL
FSTTAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLIVQGKKGEDVLGLLRR
ALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLLQDPAYLPEELGALRSWFQTLTTQ
EPCQRAVETVLKQQGVLALRSYLQKQPQPSLPEERAVSNEPEEEELATLTEEEIAMAVTA
WEKGLESLPPFRPQQNPVLPVAEERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSR
LRQWNTLYLCGTDEYGTATETKAMEEGLTPQEICDKYHTIHADIYRWFNISFDIFGRTTT
PQQTKITQDIFHRLMARGFVLQDSVEQLRCERCARFLADRFVEGVCPFCGYEEARGDQCD
KCGKLINAIELKKPKCKVCRSCPVVKSSQHLFLDLPKLEKRLEEWLGKTLPGSDWTPNAR
FIIRSWLRDGLKPRCITRDLKWGTPVPLKGFEDKVFYVWFDATIGYLSITANYTDQWEQW
WKNPEQVDLYQFMAKDNVPFHGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRG
VGVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFINRAGM
FVSKFFGGCVPEMVLTPDDQRLLAHITLELRHYHQLLEKVRIRDALRSILTISRHGNQYI
QVNEPWKWIKGSEADRQRAGTVTGLAVNIAALLSTMLQPFMPTVSTTIQAQLQLPLPACS
VLPMNFLCTLPAGHQIGTVTPLFQKLENDQIESLRQRFGGGQAKVFPKPAVVETVTTVGP
QQIQMLMDEVTKQGNIVRELKAQKADKNQVAAEVAKLLDLKKQLALAEGKPLETPKGKKK
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagactgttcgtgagcgagggcgccccggggagcctgccggtgctggctgcggccggg
agggcccggggcagagctacagagctgctcatcagcactgtaggccccgaagagtgtgtg
gtcccgttcctgacccggcctaaagtccctgtcttgcaactggatagtggcaactacctc
ttttccactactgcaatctgccgatacttctttctgttatctggctgggagcaagatgac
ctcaccaaccagtggctagaatgggaagcaacagagctgcagccagccttatctgctgcc
ttgtactacttaattgtccaaggaaagaagggggaagatgttcttggactacttcggaga
gccctgactcacattgaccacagcttgagtcgacagaattgtcctttcctggctggggaa
acagaatctctagcagacattgttttgtggggagcactatacccattactccaagaccca
gcttacctccctgaggaactgggtgccctgcgtagctggttccagactctgactactcag
gagccatgtcagcgagctgtagagactgtgctgaaacagcagggtgtcctggctctccgg
tcttacctccaaaagcagcctcagcccagtctacctgaggagagggctgtcagcaatgag
cctgaggaggaggagctggccaccttaactgaggaagagattgctatggctgtgactgct
tgggaaaagggcctggaaagcttgcccccctttcggccccagcagaatccagtgttgcct
gtggctgaggagaggaatgtgcttatcaccagtgcactcccttatgtcaacaatgtccct
catcttggaaacatcattggttgtgtgctcagtgctgatgtctttgccaggtactctcgc
ctccgtcagtggaacactctctatctgtgtgggacagatgaatatgggaccgcaacggag
acaaaagctatggaagagggcctaactccccaggaaatctgtgacaagtaccataccatc
catgctgacatctaccgctggtttaatatctcatttgatatttttggtcgtaccaccact
ccacagcagaccaaaatcacccaggacatcttccatcggttgatggcacgaggttttgtg
ctgcaagatagtgtggaacaactccgatgtgagcgttgtgcccgtttcctggctgaccgc
tttgtggagggagtatgtcccttttgtggctatgaagaggctagaggtgatcagtgtgac
aagtgtggcaagctcatcaatgctattgaactcaagaaacctaaatgtaaggtttgccgg
tcatgccctgtggtaaagtcctcccagcacctgttcttggacctgcctaagttggaaaag
agattagaggaatggttggggaagacattgcctggcagtgattggacacccaatgcacgg
tttatcattcgttcttggcttcgggatggcctcaagccacgctgcataacccgagacctc
aaatggggaactcctgtacccttaaaaggttttgaggacaaggtattctatgtctggttt
gatgctactattggctacttgtccatcacagccaactacacagaccagtgggaacaatgg
tggaagaacccagagcaagtggacctttaccagttcatggccaaagacaacgttcccttt
catggcttagtctttccttgttcagccctaggagctgaggataactacaccttggtcaag
cacctcattgctacagagtacctgaactatgaggatgggaaattctctaagagccgtggt
gtgggagtgtttggagatatggcccaggacacagggatccctgctgacatctggcgcttc
tatctgctatacattcgtcctgagggccaggacagtgccttctcctggacagacatgctg
ctcaagaataattctgagctgcttaacaatctgggcaacttcatcaacagagctgggatg
tttgtgtctaagttttttgggggctgtgtgcctgagatggtgcttacccctgatgatcag
cgcctgctggcccatattaccctggagctccgacattatcaccaactgctggagaaggtt
cggatccgggatgccttacgcagtatccttaccatatctcgacatggtaaccagtacatt
caagtgaatgagccctggaagtggattaaaggcagtgaggctgacaggcagcgggcaggc
acagtgacaggcttggcagtgaatatagctgccttgctgtccaccatgctccagcctttc
atgcccacggttagcaccaccatccaggcacagctgcaactcccgcttccagcctgcagt
gtccttcccatgaacttcctgtgtactttaccagcagggcaccagattggcacggtcact
cctttgttccaaaaactggaaaatgaccagattgaaagtttgaggcagcgatttggaggg
ggccaggcaaaagtattccccaagccagcagttgtagagactgttacaacagtggggcca
cagcagatacaaatgcttatggatgaagtgacaaaacagggcaacattgtccgagaactg
aaagcacaaaaggcagacaagaaccaggttgctgcggaggtggctaaactcttggatcta
aagaaacagttggctctagctgaggggaaacctcttgaaactcctaaaggcaaaaagaaa
aagtga
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