Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101971949
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Entry
101971949 CDS
T10664
Symbol
Tmtc4
Name
(RefSeq) protein O-mannosyl-transferase TMTC4 isoform X2
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
iti01003
]
101971949 (Tmtc4)
Glycosyltransferases [BR:
iti01003
]
O-Glycan biosynthesis
O-linked Man type
101971949 (Tmtc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TMTC_DUF1736
TPR_2
TPR_8
TPR_17
TPR_11
TPR_16
TPR_12
TPR_19
TPR_14
TPR_10
TPR_CcmH_CycH
TPR_9
TPR_Slam
TPR_15
ARM_TT21_C
ARM_TT21_5th
TPR_MalT
FAT
NatA_aux_su
BTAD
RNPP_C
ARM_ECM29_C
Motif
Other DBs
NCBI-GeneID:
101971949
NCBI-ProteinID:
XP_005317071
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAELDTDLDHIIPSSVLPPFWAKLVVGLVSLLCFARSYDGDFVFDDSEAIVNNKDLQADT
PLGDLWHHDFWGSRLSSNTSHKSYRPLTVLTFRINYYLSGGFHPVGFHVVNILLHGGISV
LMVDVFSVLFGGLQYTSKGRRVHLAPRASLLAALLFAVHPVHTECVAGVVGRADLLCTLF
FLLSFLGYCKAFRESNKERAHSSTLWVLLSIFLGAVAMLCKEQGITVLGLNAVFDILVIG
KFNIVEAIQKILRRDKSLENIGMLRSGGLLFRMTLLTSGGAGVLYVRWRIMGTGPPAFTE
VDNPASFADSMLVRAINYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSVGDWRVIALAA
LWLCLIGLICQALCSEDSGKRRILTLGLGFLVIPFLPASNLFFRVGFVVAERVLYLPSAG
YCMLLTFGFGALSRHTKKKKLIAAFVLGILFINILRCMIRSGEWRSEDQLFRSALSVCPL
NAKVHYNIGKNLADKGNQSAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLS
LAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKYRKKYPDCYYNLGRLYADLNRH
VDALNAWRNATMLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSLMFSLAN
VLGKSQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLNLAKKHYEISLQLDPAAA
GTKENYGLLRRKLEQMQRKDV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctggacaccgatttggatcacatcatcccatcttcggtccttccccctttc
tgggctaagttagtagtgggacttgtttccctcctgtgttttgcacggagctatgatgga
gattttgtctttgacgactcagaagctattgttaacaataaggacctccaagcagacaca
cccctgggagacctgtggcatcatgacttctggggcagcagactgagcagcaacaccagc
cacaagtcctaccggcctctcaccgtgctgactttcaggattaactactatttgtcaggc
ggcttccaccccgtgggtttccatgtggtcaacattctgctgcacggtggcatctccgtc
ctcatggtggacgtcttctctgtattatttggtggcctgcagtacaccagtaaaggccgg
agggtgcacctggccccgagagcatccctgctggctgcgctgctgtttgccgtccatcca
gtgcacactgagtgcgttgctggcgttgtcggccgcgctgacctcctgtgcaccctgttc
tttttgttatctttccttggctactgtaaagcgtttagagaaagtaacaaggagagagca
cactcatctaccctctgggtgttgctgagcatcttcttgggagcagtggccatgctgtgc
aaagagcaagggatcactgtgctgggcttgaatgcggtgtttgacatcttggtgataggc
aaattcaacattgtggaagccatccagaagatactacgtagggacaagtcgttagagaat
atcggcatgctcaggagtgggggcctcctcttccgaatgaccctcctaacctctggaggg
gctggggtgctatacgtgcgctggagaatcatgggtactggcccgccggcatttaccgag
gtcgacaacccggcctcctttgctgacagcatgttggttagggccataaactataattac
tactattcattgaatgcttggctgctgctgtgtccctggtggctctgttttgattggtca
atgggctgcatccccctcattaagtccgttggtgactggagggtaattgctctagcagca
ctttggctctgcctaattggcctaatatgccaagccctgtgctccgaagacagcggcaag
agaagaatccttacactgggcctaggatttcttgtgatcccctttcttcctgcaagcaac
ttgttcttccgagtgggcttcgtggtggccgagcgggtcctctacctccccagcgctggc
tactgcatgctgctgacctttggatttggagccctgagcagacataccaaaaaaaagaag
ctcatcgctgccttcgtgctggggattttgttcatcaacatcctgagatgcatgattcgc
agtggggaatggcggagcgaagaccagctttttagaagtgccctgtccgtgtgccccctc
aatgctaaggttcactacaacattggcaaaaacctggctgacaaaggcaaccaatcggcg
gccatccgatactaccgggaagcagtgaggttaaatcccaagtatgttcacgccatgaat
aatcttggaaatatcttaaaagaaaggaatgagctacaggaagccgaagagctgctgtct
ttggctgttcaaatacagccagactttgctgctgcgtggatgaatttgggcatagtgcaa
aacagcctgaaacggttcgaggcagcagagcagagttaccggacagcaattaaatacaga
aagaaatacccagactgctactacaacctcgggcgtctgtatgcagatctaaatcgccac
gtagacgcattgaacgcgtggagaaatgccaccatgctgaagccagaacacagcctggct
tggaacaacatgatcatcctccttgacaatacaggtaatttagcgcaggctgaagcagtt
ggaagagaggcactggaattaatacctaatgatcattctcttatgttctccttggcaaac
gtgctggggaaatcccagaaatacaaggaatctgaagctttattcctcaaggcaattaaa
gcaaatccgaatgctgcaagttaccatggtaatttggctgtgctttatcatcgttgggga
catctcaacttggccaagaaacactatgaaatctccttgcagcttgaccccgcggcagca
ggcaccaaggagaattatggccttttgagaagaaagctggaacaaatgcagagaaaggat
gtctga
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