Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972016
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Entry
101972016 CDS
T10664
Symbol
Pex5l
Name
(RefSeq) PEX5-related protein isoform X4
KO
K13342
peroxin-5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101972016 (Pex5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101972016 (Pex5l)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101972016 (Pex5l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_11
TPR_19
TPR_CcmH_CycH
TPR_14
TPR_9
TPR_12
TPR_16
CFAP70_TPR_C
RMD1-3
TPR_20
CFAP70_mid_TPR
ANAPC3
PPTA
ARM_TT21_C
DUF4248
DUF4315
Motif
Other DBs
NCBI-GeneID:
101972016
NCBI-ProteinID:
XP_005330321
UniProt:
A0A287D229
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSDSEMDGRTHIPSLLNVLLSRNRVMQMSYLKSKEQGYGKLSSDEDLEIIVDQKQGKGSR
AADKAVAMVMKEIPREESAEEKPLLTMTSQLVNEQQESRPLLSPSIDDFLCETKSEAIAR
PVTSNTAVLTTGLDLLDLSEPVSQTQTKAKKSESSSKTSSLKKKADGSDLISADAEQRGQ
PLRGSETSSLDLDIQTQLEKWDDVKFHGERNSKGHPMAERKSCSSRTGSKELLWSSEHRS
QPELSSGKSALNSESASELELVAPAQARLTKEHRWGSALLSRNHSLEEEFERAKAAVESD
TEFWDKMQAEWEEMARRNWISENQEAQNQVTVSASEKGYYFHTENPFKDWPGAFEEGLKR
LKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKA
LMALAVSYTNTGHQQDACESLKNWIKQNPKYKYLVKSKKGSPGLTRRMSKSPVDSSVLEG
VKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGA
TLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSR
NQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLDP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtgaaatggatggaaggactcacattccatctctacttaatgtccttttg
tccagaaatcgggtcatgcaaatgagctacttgaaaagtaaagaacaaggatatggaaaa
ctaagcagtgatgaagacctcgaaataattgttgatcaaaagcagggaaaaggctctagg
gcggcagataaggctgttgccatggtgatgaaggagataccgagggaggagtctgctgaa
gaaaagcccctccttactatgacatcacagctggtgaatgagcaacaagaaagcagaccc
ctcctgagcccctccatcgatgactttctctgtgaaaccaaatcggaggcaattgcaagg
ccagtaacgtccaatacagctgtgttgaccacaggcttggatctcctggacctgagtgaa
ccagtgtctcaaacccaaaccaaagccaagaaatcggaatcctcatcaaaaacttcatcc
ctcaagaaaaaggccgatggatctgacctcatcagcgcagatgctgagcagagaggccag
cctctcagagggtccgagacctcatccttagatttagacattcaaacccaactggaaaaa
tgggatgatgttaagtttcatggagagcgaaatagcaaggggcatccaatggcagagaga
aaatcatgttcatctagaacgggatcgaaagagctcttatggtcttcagagcacagatct
caaccggaactgagtagtgggaagagtgccctcaactctgagtcagcttcagagttggaa
ctagtggctccggcacaggctcgactgaccaaagaacatcgctggggaagtgctttactt
tctagaaaccactccttagaagaggaatttgaaagggcaaaagcagcagtggagtcagat
acagagttttgggataagatgcaagcagaatgggaagagatggcccggaggaactggata
tctgagaaccaagaagcccagaaccaagttacagtctcagctagtgagaagggatattac
tttcacactgaaaaccccttcaaggactggcctggagcatttgaagaaggcttaaaaagg
ctgaaggaaggggacctcccagtcaccattctgttcatggaggcagcgattcttcaggac
cccggggatgcagaggcttggcagttcctcgggataacacaggcagagaatgaaaatgaa
caagcagccattgtcgccctccagaggtgcttagaactgcagcccaacaacttgaaagct
ttgatggctttggctgtgagttacacaaacactggtcatcagcaggatgcctgtgaatct
ttgaagaattggattaagcaaaatccaaagtacaaataccttgtgaagagcaagaaggga
tctccaggcctcactcgaaggatgtctaaatccccagttgacagctctgttctggaagga
gtgaaggaattatatctggaagctgcccaccaaaatggagacatgatcgaccccgacctc
cagacaggcctgggggtactgttccacctgagtggagagttcaacagagcaatagatgca
tttaacgctgccttaactgttcggccggaggactattcattatggaaccgtcttggggca
accttggccaatggagaccgcagtgaggaagccgtggaggcctacactcgagctctggag
attcagccaggctttatccggtccagatacaacctgggaatcagctgcatcaacctgggc
gcctacagagaagcggtcagcaattttctcactgccctcagtttgcaaagaaagagcagg
aatcaacagcaagttcctcatcccgccatctctgggaatatctgggctgccctcagaatt
gcactgtctctgatggaccaaccagagctcttccaggcagctaatctcggcgacctggat
gtcctcctaagagctttcaacttggatccttga
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