Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972056
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Entry
101972056 CDS
T10664
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03083
Polycomb repressive complex
iti04980
Cobalamin transport and metabolism
iti05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101972056 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
101972056 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101972056 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101972056 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101972056 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101972056 (Hcfc1)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101972056 (Hcfc1)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
101972056 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
101972056 (Hcfc1)
MLL-HCF complex
101972056 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
101972056 (Hcfc1)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
101972056 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
101972056
NCBI-ProteinID:
XP_005340681
UniProt:
I3N3V9
LinkDB
All DBs
Position
X:complement(119089236..119116163)
Genome browser
AA seq
2091 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTSTATTAMSSIGAGQQRDTRRAST
TPTVVRISVVPGALEGAQSSVKPQCQTRQTSATSTTMTVMATGAPCSTGSLLRPSMALEA
GVHSPAFVQLAPLSGKVGPSGPSNKDVLLGRQLETHHTHTTNTPTTARSIIGTGEPSAAC
VVPTPAYESLQTSSPSTTVTVTALEAMLCPSSTMTQVCSNPPCETHETGTTNTATTSNAG
SAQRVCSNPPCETHETGTTHTATTATSNGGAGQPEGGQQPPAGRPCETHQTTSTGTTMSV
SMGALLPDAAPSHRTLESSLEATAVPTVTSQAGAALLAPFPTQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGEVESTQGDSVNIASSSAITTTVSSTLPRAVTTVTQST
PVPGPSVPKISSLTETTPGALTSEVPIPATITVTIANTETSDMPFSAVDILQPPEELQVS
PGPRQQLPPRQLLQSSSTPLMGESTEVLSASQTPELQTAVDLSSTGDPSSGQEPASSAVV
ATVVVQPPQPTQSEVDQLTLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAAT
EEAQALAIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELGHLSAEGQEGQATTIPIVL
TQQELAALVQQQQQLQEAQAQAQQQHHLPTEALAPADSLNDPTIESNCLNELAGAVPSTV
ALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPPSKA
PVKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGTVPDYNQLKKQELQPGTAYKF
RVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYS
VYLAIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIA
ARNEKGYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6276 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggtgcttctgcaaccccgctggaag
cgagtggtgggctggtcgggtccggtgccccgaccccgccacggccaccgtgccgtggcc
atcaaggagctcatcgtggtgtttggtggcggcaacgaagggatagtggacgaactgcac
gtgtacaacacggccaccaaccagtggttcatcccggctgtgagaggggacatccctccg
gggtgcgctgcctatggcttcgtatgtgatggtactcgcctgctggtgtttggtgggatg
gtggagtacgggaaatacagcaacgatctctacgagctccaggcaagccggtgggagtgg
aagagactcaaagcaaaaacgcccaaaaacgggccccctccatgtcctcgccttgggcac
agcttctcccttgtgggcaacaaatgctacctattcgggggtctggccaacgatagcgag
gaccccaagaacaacattccaaggtacctgaatgacttatatatcctggaattacggcca
ggctctggagtggtagcctgggatatccccatcacttatggagtcttgcctccacctcga
gagtcacatactgctgtggtctacacagaaaaagacaataagaaatccaaattggtgatc
tatggagggatgagtggctgcaggctcggagatctctggaccctggatattgagacgctg
acatggaataagcccagtctcagtggggtggcaccccttcctcgcagtcttcactctgca
actaccataggaaacaaaatgtatgtgtttggtggctgggtgcctctcgtcatggatgat
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacgctggcttgtctcaac
ctggataccatggcctgggagaccatcctgatggacacactggaggacaacattcctcgt
gctcgagctggccactgtgcagttgccatcaacacccgcctgtatatttggagtgggcgc
gatggctaccggaaggcctggaacaaccaggtctgctgcaaggacctctggtacttggag
acagaaaagccaccacccccggcccgggtacaactggtacgagccaacaccaactccctg
gaggtgagctggggggcagtggcaacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgctactgccacctcccccacacccaatccagtcccatctgtg
cctgccaaccctcccaagagccctgccccagcagcagccgcacctgctgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgccgccgcacccccgaccaccaccacc
atccaggtcttgccgacagtgccaggcagctccatttctgtgcccactgcagccaggact
caaggtgtccctgctgttctcaaagtgactggtcctcaggctacaacaggaaccccattg
gtcacaatgcggcctgccagccaggctgggaaagcccctgtcactgtgacctccttgcct
gccggtgtgcgaatggttgtgcccacacagagtgcccaggggacggtgattggtagcagt
ccgcagatgagtggaatggccgcattggcagctgctgctgctgccacccagaaaatccct
ccttcttcggcgcctacagtgctgagtgtccccgcgggcaccaccatcgtcaagactgtg
gctgtgacacctggcacgaccaccctcccagccactgtgaaggtggcctcctctcccgtc
atggtgagcaatcctgctactcgtatgctgaagactgcagctgcccaagtggggacatct
gtctcctctgccgctaacacgtctacccgccctattatcacggtgcacaagtcagggacc
gtgaccgtggcccagcaagcccaggtggtgaccacagttgtaggtggggtcaccaagacc
atcacccttgtgaagagccccatctccgtcccaggaggcagtgctttgatttccaatctg
ggcaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtcacaggccag
gcatctacgggtcctgtaactcagatcatccagaccaaaggacccctgccagcagggaca
atcctgaagctggtgacctcagcagatggaaaacctaccaccatcatcaccaccacgcag
gccagtggagcagggaccaagcccaccatcctgggcatcagcagtgtctcccccagcact
accaaacctggcacgaccaccattatcaagaccatccccatgtctgccatcattacccag
gcaggcgcaacaggtgtgactagtagtcctggcatcaagtcccccatcaccattattacc
accaaggttatgacttcaggaactggagcacctgctaaaatcatcactgctgtccccaag
attgccactggccatgggcagcaaggagtgacacaggtggtgctaaagggggcccctgga
cagccaggcaccatcctccgcaccgtgcccatggggggcgttcgcctggtcacccctgtc
accgtctctgccgtcaagccagccgtcaccacattggttgtgaagggtaccacaggtgtc
acaaccctaggcacggtgacgggcactgtttccaccagccttgctggagctgggggccat
agcaccagcgcctccctggccacgcccatcaccacattgggtaccatcgccaccctctcg
agccaggtgattaaccccaccgccattaccgtgtcagctgcgcagaccacactgacggcc
gctggcgggctcaccacacccaccatcaccatgcagcctgtctctcagcctacccaggtg
actctgattacagcgcctagtggggtcgaggcccagcctgtgcacgaccttcctgtgtcc
attctggcctcacctactacagagcagcccacagccacagtcaccattgccgactctggc
cagggtgatgttcagcctggcaccgtgacactggtgtgctccaacccaccctgtgagacc
cacgagacgggtactaccaacacggccaccaccactgttgtggccaaccttgggggacac
ccccagcccacccaagtgcagtttgtctgtgataggcaggaggcagctgcttctcttgtg
acctcaactgtggggcagcagaatggtagtgtggtccgcgtctgctcaaacccaccctgt
gagacccatgagacaggaaccaccaacactgccaccacagccacctccaacatggctggg
cagcatggctgctcaaacccaccctgtgagacccatgagacgggcaccaccagcaccgcc
acgacggccatgtccagcattggtgctggccagcaacgagatacccgtcgtgcctctacc
acccccactgtggtccggatcagtgtggttcctggggcattggagggagcccaaagttct
gtcaagccccagtgccaaacccgccagaccagtgcaaccagcaccaccatgactgtgatg
gccactggggccccatgctcaactggctccctgctgaggccaagcatggccctggaagct
ggggtccacagccctgcttttgtgcagttggcccctctgagtggtaaagtcgggccaagt
ggccccagcaacaaggacgtgctcctggggcgccagttggagacgcatcacacacacaca
accaacacccccaccacggcacgttccatcataggtactggggagcccagtgcagcttgt
gtggtccccacacctgcatacgagagcctccaaaccagttcacccagcaccactgtaact
gtgacagccctggaggctatgctgtgcccctcatccacaatgacccaagtctgctccaac
ccgccatgcgagacccacgagacaggcaccaccaacaccgccactacctccaatgcaggc
agcgcccagcgggtgtgctccaacccgccttgtgagacccatgagacgggtaccacacac
acggccaccactgccacctcaaatgggggggcaggccagcccgagggtgggcagcagccc
cctgctggccgaccctgtgagacgcaccagaccacttccacaggcaccactatgtcagtc
agcatgggtgccctgctccctgatgctgccccatcccacaggaccctggagtccagcttg
gaggcaacagcagtgcccaccgtcacctcccaggctggtgctgcattgctggctcctttc
ccaacacagagggtgtgctctaaccccccctgtgagacccacgagacgggcaccacacac
acagccaccactgtcacctccaacatgagctcaaatcaagatcccccaccagccgccagt
gatcagggagaggtggagagcacccagggtgacagtgtgaacatcgccagctccagtgcc
atcacaacaactgtgtcctccacgctgccacgggcagtgaccaccgtgacacagtccaca
cctgttccaggcccctccgtgccgaagatttcatcactgactgagactaccccaggggct
ctgacttccgaagtccccatcccagccacgataacagtgaccatagccaacacagaaact
tctgacatgcccttctctgctgttgacatcctgcagcccccagaggaactccaggtctca
ccaggacctcgccagcagctgccgccacggcaactcctgcagtcttcctccacacccctg
atgggggagtccaccgaggtcctgtcagcctcccagacccctgagcttcagactgccgtg
gatctgagcagcacaggggacccatcttcaggccaggagcctgccagctcagcggtagtg
gccactgtggtggtccagccaccccagcccacacagtctgaagtagaccagttaacactt
ccccaagagctgatggctgaggcccaggcaggcaccaccaccctcatggtaacagggctc
acccctgaggagcttgcagtgactgctgctgcagaagcagctgcccaggctgcagccacc
gaggaggcccaggccctggccatccaggcagtgctccaggccgcacagcaggctgtcatg
gcaggcaccggggagcccatggacacatccgaggcggcagcagctgtgacacaagcagaa
ctgggtcacctttcagccgagggccaggagggccaggccaccaccatccctattgtgctg
acacagcaggaattggctgccttggtgcagcaacagcagcagctgcaggaggcccaggcc
caggcccagcagcagcaccatctccctactgaggccctagccccagccgacagcctcaat
gacccaaccattgaaagcaactgcctcaatgagctggctggtgccgtccccagtaccgtg
gctctgctgccttcaacagccactgagagcctggctccgtccaacacctttgtggccccc
cagccagttgtggtagctagcccagcgaagctacaggctgcagctaccctaactgaagtg
gccaatggcatagagtccctgggtgtgaagccagacctgccaccaccacccagcaaagcc
cctgtgaagaaggagaaccagtggtttgatgtgggggtcattaagggcaccaatgtgatg
gtgactcactatttcctgccacctgatgatgctgtcccatcagatgatgactcaggcact
gtccctgactataaccaactgaagaagcaggagctacagccaggcacagcctataagttt
cgtgttgctggtatcaacgcttgtggccgggggcccttcagcgagatctcagcctttaag
acatgtctacctggtttcccaggggccccttgtgccattaaaatcagcaaaagtccagac
ggtgctcacctcacctgggagccgccttctgtgacctccggcaagatcatcgagtactct
gtgtacctggccatccagagctcacaggccggcggcgagcccaagagctcaaccccagcc
cagctggcctttatgcgagtgtactgcgggcccagcccctcttgccttgtgcagtcctcc
agcctctccaatgcccacattgactacaccaccaagcccgccatcatcttccgcattgct
gcccgcaatgagaaggggtacggcccagccacacaagtgaggtggttgcaagaaaccagt
aaagacagctcaggcaccaagccggccagcaagcggcctatgtcctctccggaaatgaaa
tctgctccaaagaaatctaaggcagatggtcagtga
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integrated database retrieval system
