Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972150
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Entry
101972150 CDS
T10664
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101972150
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Protocadherins
101972150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
101972150
NCBI-ProteinID:
XP_005336847
UniProt:
I3N849
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MSSVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFSFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPAASPFAAAAAAAALGGTDATSSAGPGTQEAGATSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLLEAE
VGRSGDAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVL
DQNDHAPVLVHPAPANGTLEVAVPGRTSRDTAVARVQARDADEGANGELSFDLQQQEPRE
VFAIGRRTGEIVLTGDLSQEPPGRVFRALLVISDGGRPPLSTTATVSFVVTAGGGRSPAV
PASVGSPEHSRPPGSRLEASGPALQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKE
VRKGGPLREERPGAAGGGASAPGSPEETARGAGPRPNMFDVLTFPGSGKAPFGSPAADAP
PPAVAAAEVPGSEGGSATGESSCHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHS
FNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGH
SDRCWSPSCGGPNSHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEK
VLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgtgaggcgctggggcagcccttgccttttccccctgcagctcttcagcctc
tgctgggtgctttcagtggcccagagcaagacagtccgatacagcaccttcgaggaagat
gcccccggcacggtcatcgggaccctagctgaggacctgcatatgaaagtatctggagac
acaagcttccgcctgatgaagcaattcaacagctctctgcttcgggtgcgcgagggtgac
gggcagctgaccgtcggggacgcaggcctggaccgcgagcgactgtgtggccaggccccg
cagtgtgtgctggcgttcgacgtggtcagcttctcacaggagcaattccggctggtgcac
gtggaggtggaggtgagggacgtcaacgaccatgcgccgcgcttccccagggcccagatt
ccagtggaggtgtccgagggtgcggcggtgggcacgcgcatccccctggaggtgccggtg
gatgaggacgtgggtgccaatgggctgcagagtgtgcgattagctgagccacacagcccg
ttccgagtggagctgcagacgcgtgcggacggcgcccagtgcgcggatctggtgctgttg
caggagctggaccgcgaaagccaggctgcttacagcctggagctagtggcccaggacggc
gggcgccctccacgctctgccaccgcagctctcagcgtgcgtgtgctggacgccaacgac
cacagcccagccttccctcagggcgcagtggccgaggtagaattggcagaggatgctccg
gtgggctcgttattgctggacctggacgcggcggacccggacgagggccccaacggcgac
gtggtgttctccttcggcgctcgcaccccacccgaagcgcgccgcctcttccggctggac
ccgcgctcgggtcgcctcaccttggcgggacccgtagactacgaacgccaggacacctat
gagctggacgtgcgggcgcaggaccgaggccctggtccccgggccgccacctgcaaggtg
atcgtgcgcatccgcgacgtcaatgacaatgctcccgacattgctattaccccgctcgcg
gccccgggagcgccagcagcctcgcccttcgccgccgccgctgccgccgccgcactcggg
gggacggacgcgacctcttcggctggtccagggactcaagaggccggcgccacctcgttg
gtgcctgagggggcggcgcgtgagagcctggtggcgctggtcagcacctcggacagggac
tcgggcgcaaatgggcaggtgcgctgcgccctctatgggcacgagcacttccgactgcag
ccggcctacgcaggcagctacctggtggtgaccgcagcttctctagaccgtgagcgcatc
gccgagtacaatctgacgctagtggccgaggaccgtggcgcgcccccgctgcgcactgtg
aggccctatactgtgcgtgtgggcgacgagaacgacaacgcgccactcttcacgcggcca
gtctatgaggtgtcggtgcgcgagaacaatcctcctggagcctacctggccaccgtggct
gcccgggatccggacttgggccgcaacggccaggtcacctacaggctgctagaggctgaa
gtgggccgctccggagatgcagtgtctacctacgtctcagtggaccccgctacaggagca
atctacgcgctgcgcagcttcgactatgagactctgcgccagctcgacgtgcgcatccaa
gctagcgacggcggctcccctcagctttccagcagtgctctcgtgcaagtgcgggtgctg
gaccagaacgaccatgcaccggtactggtgcacccagcgccagcaaacggcactctagaa
gtagcagtccccggacgcacatctagggacacagctgtggcgcgcgtgcaggcccgggat
gctgatgagggtgccaatggggagctgtcattcgacctacagcagcaggagccacgcgaa
gtcttcgccatcggccgccgcacgggggagatcgtgctcaccggagacctctcgcaggag
ccaccaggccgcgtgtttagggcgctgctggtcatatccgacggcggccgcccacctctc
tccaccacagcaactgtcagcttcgtggtaacagccggcggcggacgcagtccggctgtg
cctgccagtgtagggagcccggagcactcccgcccgcctggctctcggctagaggcgtcg
gggccggcgctgcaatgggacacgccactgattgtcatcatcgtgttggccgggagctgc
acgctactgctggccgctatcatcgccatcgctaccacttgcaaccgccgcaagaaggag
gtgcgcaaaggggggcccctccgggaagagcggcccggggcggcgggcggcggagcctcg
gctcccggctccccggaggagacagcccggggagctgggcccaggcccaacatgttcgac
gtgctcaccttccctggcagcggcaaagcgccctttggcagccccgcggccgacgcgccc
ccgcccgcggtcgccgcggccgaagtgccgggctcggagggcggcagcgccactggggaa
agctcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggt
gcctccccgggcttcggaaaggagccggcgccccctgtggcggtctggaagggacactct
ttcaacacaatctccggcagagaagcggagaagttcagcggtaaagacagcggcaaaggg
gacagtgatttcaacgacagcgattccgacatcagcggggacgctctaaaaaaggatctc
atcaaccacatgcagagtggactgtgggcatgcactgctgagtgcaagatcctgggccac
tctgaccgttgctggagcccatcctgtggagggcccaactcgcaccccccacctcaccca
ccagcccagatgtcaaccttctgtaagagcacgtcccttcctcgggatcctctgcgcagg
gacaattactaccaggcccagctgcccaagacagtgggactgcagagtgtctatgagaaa
gtgctgcacagagactatgacaggacagtcactctcctctcccctcctcgtccagggagg
ctcccagaccttcaagagattggggtacccctctaccagtcccctcctggaagatacctg
tctccaaagaagggagccaatgaaaatgtgtaa
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