Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972159
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Entry
101972159 CDS
T10664
Symbol
Nlgn1
Name
(RefSeq) neuroligin-1 isoform X5
KO
K07378
neuroligin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101972159 (Nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101972159 (Nlgn1)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
101972159 (Nlgn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
101972159
NCBI-ProteinID:
XP_021590777
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MAQPRCMWPDYVWKAVMACLVHRGLGASLTLCMLGCLIQAAHVLSQKLDDVDPLVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDVRNATQFAPVCPQN
IIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDGPLTKKQTDDLGDNDG
AEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLST
GDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGLF
QRAIAQSGTALSSWAVSFQPAKYARMLATKVGCNVSDTVELVECLQKKPYKELVDQDIQP
ARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVENIVDSDDGISAS
DFDFAVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPA
VATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHGDEVPYVLGIPMIGPTELFPCNFS
KNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQKDQLYLHIG
LKPRVKEHYRANKVNLWLELVPHLHNLNDISQYTSTTTKVPSTDITLRPTRKNSVPVTSA
FPTAKQDDPKQQPSPFSVDQRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHDVH
RRCSPQRTTTNDLTHAQEEEIMSLQMKHTDLDHECESIHPHEVVLRTACPPDYTLAMRRS
PDDVPLMTPNTITMIPNTIPGIQPLHTFNTFTGGQNNTLPHPHPHPHSHSTTRV
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccagatgcatgtggccagattacgtttggaaagcagtgatggcatgcttg
gtacacaggggattgggcgcctcgttgactctctgtatgttgggatgtttaattcaggct
gcccatgtgctctcacaaaaattggatgatgtggacccactggtgacaaccaactttggc
aagataagagggattaagaaagaactcaataatgaaattttggggcctgttattcagttt
cttggagttccgtatgcagctccaccaacaggagaacatcgttttcagcctccagaacca
ccatctccctggtcagatgtcaggaatgccactcagtttgctcctgtgtgtccccagaat
atcattgatggcaggttgccagaagtcatgcttcctgtgtggtttaccaataacttggat
gtggtttcttcatatgtacaagaccagagtgaagactgcctttatttaaacatatatgtc
ccaactgaggatggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagatatccgggacagtggaggtcccaagccagtgatggtgtatatccat
ggtggctcatacatggaaggtacgggaaatttatatgatgggagtgtgctggcgagctat
ggcaatgtgatcgtcatcactgtcaactatcggcttggggtacttggtttcttgagtaca
ggagatcaggccgcaaaaggaaactatggacttcttgatctcatacaggctttaagatgg
actagtgagaacattggattctttggtggtgaccccttgagaatcactgtttttggatca
ggcgctgggggttcatgtgtcaatctgctgactttatcccattattctgaaggacttttt
caacgagcaatagctcaaagtggaacagccctttccagctgggctgttagtttccaacct
gcaaaatatgctagaatgttggccacaaaagttggttgcaatgtttcagatacagtagag
ttagtggaatgcctccagaagaagccttacaaagaacttgttgatcaagatattcagcct
gccagataccacatagcctttggacctgtgatcgatggtgatgtcataccagacgacccc
cagatattgatggagcaaggagagtttctcaactatgacataatgttaggagttaaccaa
ggggaagggttaaaatttgttgaaaatatagtagatagtgatgatggtatatcagctagt
gactttgactttgctgtttccaattttgttgataatttatacggctatcctgaaggcaaa
gatgttttgagagaaaccattaaattcatgtacactgactgggctgatcggcataaccct
gaaaccagaaggaagacactgttggcattatttactgaccatcagtgggtggcaccagct
gtagccacagcagatcttcactcaaactttggttcacccacatacttctacgccttttac
catcattgccaaacagatcaggttccagcttgggctgatgcagcccatggagatgaggtt
ccctatgtattgggaatccccatgattggtcccacagagttatttccttgcaatttctcc
aaaaatgatgtgatgctgagtgctgtcgtaatgacatactggacaaactttgctaaaact
ggtgaccccaatcaaccagtccctcaagacacaaaattcatccataccaaacccaaccgc
tttgaagaagtagcatggaccagatattcccagaaagaccaactttatctccatattgga
ttaaaaccaagagttaaagagcattacagggccaataaggtgaacctctggttggagctg
gtacctcatctgcataatctcaatgacatttctcagtatacctcgacaacaactaaagtg
ccatcaactgacatcactcttagacccacgagaaaaaattctgtacctgtcacatcagcc
tttcccactgccaagcaggatgatcccaaacaacagccaagtccattttcagtggatcaa
agggactactcaacagagctgagcgtcactattgcagtcggagcatcattgttgtttctg
aacatcttggcctttgcagccctgtactacaaaaaggataagaggagacacgatgtccac
aggaggtgcagccctcagcgtactaccaccaacgatctgacccatgcacaagaagaggaa
atcatgtccctccaaatgaagcacactgatttggatcatgaatgtgagtccatccatcca
catgaggtggttcttcggaccgcctgccccccagattacacactagctatgagaaggtca
cctgatgatgttcccttaatgacacccaacaccattacaatgattcccaacactatacca
gggattcaacccttacacacattcaatacatttactggaggacagaacaatactctgccc
cacccccatccccacccccattcacattcaacaaccagggtatag
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