Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972298
Help
Entry
101972298 CDS
T10664
Symbol
Galntl6
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X1
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00512
Mucin type O-glycan biosynthesis
iti00514
Other types of O-glycan biosynthesis
iti01100
Metabolic pathways
Module
iti_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
101972298 (Galntl6)
00514 Other types of O-glycan biosynthesis
101972298 (Galntl6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
iti01003
]
101972298 (Galntl6)
Enzymes [BR:
iti01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
101972298 (Galntl6)
Glycosyltransferases [BR:
iti01003
]
O-Glycan biosynthesis
Mucin-type
101972298 (Galntl6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
101972298
NCBI-ProteinID:
XP_005325563
UniProt:
I3MDN2
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MKRKQKRFLQMTLLFMVALIFLPNIGLWSLYKDKHLVKSTEPREQQTFPLGLGDGQFYSW
TDGLRRKDWHDYESIQKEAMRSGKGEHGKPYPLTEEDHDDSAYRENGFNIFVSNNIALER
SLPDIRHANCKHKMYLERLPNTSVIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDD
FSDREHLKDKLEEYMARFSKVRIVRTKKREGLIRTRLLGASMARGEVLTFLDSHCEVNVN
WLPPLLNQIALNHKTIVCPMIDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQR
ADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPC
SRVGHIYRKYVPYKVPSGTSLARNLKRVAETWMDEFAEYIYQRRPEYRHLSTGDISAQKE
LRKQLKCKDFKWFMAAVAWDVPKYYPPVEPPPAAWGEIRNVAANLCVDSKHGATGTELRL
DICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCFDAISYNSPVTLYDCHGMKGNQ
LWGYRKDRTLFHSVSNSCMDCNPAEKKIFMARCDPLSETQQWIFEHVNMTVLEKFSHHAS
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaacagaagagatttctgcaaatgactttgttattcatggtggctttaatt
ttcctgcccaatattggtctctggtctctgtacaaggataagcacctggtgaaatctaca
gagcccagggagcagcagacatttccactgggcctgggagatgggcaattctattcatgg
acagatggtttgagaagaaaggactggcatgactatgaaagcattcagaaagaggctatg
cgctcagggaaaggtgaacatgggaagccttacccccttactgaagaggaccatgatgac
tcggcatacagggaaaatggtttcaatatttttgtcagcaacaacattgccctagagaga
tccctgccagatattcgccatgctaactgtaagcacaagatgtacctggaaaggctgcca
aacaccagcgtcatcatcccatttcataatgaaggctggacttcactcctgcggaccata
cacagtataattaaccgaacccctgagagtctcatagccgaaatcattctggtagatgac
ttcagtgatagagaacacttgaaggataagttagaggaatacatggctcggttttccaaa
gtgagaattgttcgtaccaagaaaagagaaggactcatccggaccagactcctgggcgca
tctatggccagaggagaggtgctgaccttccttgactcccactgcgaggtcaacgtgaac
tggctgcccccactccttaaccaaattgcactcaaccacaaaaccatcgtgtgtcccatg
atcgatgtcattgaccacaatcactttgggtatgaggcacaagctggggatgccatgcgc
ggagccttcgactgggaaatgtactacaaaagaattcccatccctccagagctccagagg
gcagatcccagcgacccttttgagtctcctgtcatggctggaggtctctttgctgtggat
cgaaaatggttttgggaactgggtggctatgatcctggtttagaaatctggggaggagaa
caatatgaaatctcttttaaggtttggatgtgtggaggagaaatgtttgatgttccctgt
tctagagttggtcatatctacaggaagtatgtcccttacaaagttccatctgggaccagc
ctggcaagaaacctgaaacgggtggctgagacctggatggatgaatttgccgagtacatt
taccagcggcggcccgagtacagacacctctctactggggacatctctgcccagaaggag
ttgcgcaaacagctcaagtgcaaggacttcaagtggttcatggctgcagtggcctgggat
gtgcctaaatactaccctcctgtggagcccccacctgccgcctggggtgagattcggaac
gtggcagcgaatctctgcgtggacagtaagcatggagccacaggaaccgagctgaggctg
gacatctgtgtcaaggatggttctgaaaggacgtggtcccatgaacagctctttaccttt
gggtggagagaagatattcgacctggtgagccactgcatacccgaaagttctgctttgat
gcaatctcatacaacagcccagtcactctctatgactgtcatggcatgaaggggaaccag
ctctggggatatcggaaggacagaacattattccattctgtgagcaacagctgcatggat
tgcaaccctgcggagaagaagattttcatggccagatgtgaccctctgtctgagactcag
cagtggatttttgaacacgttaatatgactgttttagaaaaatttagccaccatgccagc
tcctag
DBGET
integrated database retrieval system
