Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972381
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Entry
101972381 CDS
T10664
Symbol
Mrc1
Name
(RefSeq) macrophage mannose receptor 1
KO
K06560
mannose receptor, C type
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04145
Phagosome
iti05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101972381 (Mrc1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
101972381 (Mrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101972381 (Mrc1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
iti04054
]
101972381 (Mrc1)
04090 CD molecules [BR:
iti04090
]
101972381 (Mrc1)
04091 Lectins [BR:
iti04091
]
101972381 (Mrc1)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Phagocytosis
C-lectin receptors
101972381 (Mrc1)
Pattern recognition receptors [BR:
iti04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
101972381 (Mrc1)
CD molecules [BR:
iti04090
]
Proteins
101972381 (Mrc1)
Lectins [BR:
iti04091
]
C-Type lectins
Others
101972381 (Mrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
CysR_MRC2_N
fn2
Ricin_B_lectin
UL45
Xlink
Insulin_TMD
NCE101
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
101972381
NCBI-ProteinID:
XP_040133797
LinkDB
All DBs
Position
Unknown
AA seq
1502 aa
AA seq
DB search
MSLSLLLVFVSVTPVAVQLLDTRQFLIYNEDHKRCVEAINPSAVQTAVCNPNAESQKFRW
VSESQIMSVAFKLCLGVPSKTDWVPVTLYACDSKSQFQKWECKNDTLFGIKDEDLFFNYG
NRQEKNIMLYKGSGLWSRWKIYGTTDHLCSRGYEDLYTLLGNANGAACAFPFKFENKWYA
DCTSAGRSDGWLWCGTTTDYDTDKLFGFCPLKFEGSANLWTEDPLTNVLYQINSKSALTW
HQARKSCQQQNAELLSVTEIHEQTYLTGLTSSLTSGLWIGLNSLSFTTGWQWSGGSPFRY
LNWLPGSPSTEPGKSCVSLNPGKNAKWENLECVQKLGYICKKGNNTLNTFIIPSESDVPT
KCPSQWWPYAGNCYKIHREQKKIQRDALTACRKEGGDLASIHTIEEFDFIFSQLGYEPND
ELWIGLNDLKIQMYFEWSDGTPVTFTKWLRGEPSHENNRQEDCVVMKGKDGYWADMACEK
PLDYICKMKSQTQAPETEEAETGCRKGWKRHGFYCYMIGHTLSTFAEANQTCQNEKAYLT
TVEDRYEQAFLTSLVGLRPEKYFWTGLSDIQNKGTFQWTVEEEVRFTHWNSDMPGRKAGC
VAMRTGLAGGLWDVLKCDEKAKFVCKHWAEGVTRPPEPTTTPEPKCPEEWGSTSKTSLCF
KLFAKGKHEKKTWFESRDFCRALGGELASINNKEEQQIIWRLITTSGNYHELFWLGLTYV
SPSEGFTWSDGSPVSYENWAYGEPNNYQNVEYCGELKGEPGMSWNDINCEHLNNWICQIQ
KGKTLQPEPTPAPQDNPPVTEDGWVIYKDYQYYFSKEKETMDNARAFCKRNFGDLVSIKS
ESEKKFLWKYINRNGVQTPYFIGLLISLDKKFTWMDGSKVDYVAWATGEPNFANEDENCV
TMYTTSGFWNDINCGYPNAFICQRHNSSINATVMPTTPPSPGGCKEGWSWYNNKCFKIFG
FAEEERKNWQEARKTCIGFKGNLVSIRNEKEQAFLTHLMKDSTFNAWTGLNDVNSEHTFL
WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGKSRDAGMWMDDTCDSKRGYICQT
DPDPSLPYSPTPTPKGGFIKYGESSYSLMKLKLTWYDAETYCKNSNSLISSILDPYSNAF
AWMQMYAFNVPVWIALNSNLTNNEYVWTDKWRMRYTNWAADEPKMKSACVYLDVDGYWKT
SNCNESFYFLCKRSDEIPATEPPQLPGRCPESEHSAWIPFHGHCYYIESSFTRNWGQASL
ECLRMGSTLVSIENAAESSFLSYRVEPLKSKTNFWIGLFRNVEGMWLWINNNPVSFVNWN
TGDPSGERNDCVAVDASSGFWNNIHCSSYKGYICKRPKSKVILVSQYVYNGIFMPMDLQN
CNRFGQPIYKALLYKGKGYCVLLHNPVSLSTCFLMILFIADSRKMEPSKPSSNVAGAVVF
VILLILVGAGIAAYFLYKKRRVHLPQEGTFENTLYFNSQSSPGTSDMKDLMSNIEQNEHM
VI
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtccctactcctggtttttgtctctgtcactcccgttgctgtgcagctattg
gacactaggcagtttttaatctacaatgaggatcacaagcgctgtgtggaagcaatcaat
cccagtgcggtccaaactgcggtttgcaacccgaatgctgaatcccagaaattccgatgg
gtatccgaatcccagattatgagtgttgcttttaagttatgcttgggggtgccatccaaa
accgattgggttcctgtcactctatatgcctgtgactcgaaaagccaatttcagaaatgg
gagtgcaaaaatgacacactttttgggatcaaggatgaagatttatttttcaactatggc
aatagacaagaaaagaatattatgctttacaagggatctggtttatggagcagatggaag
atctatggaaccacagatcatctatgctctagaggttatgaagatttgtacacgctgctg
ggcaatgcaaatggggccgcctgcgcatttccattcaagtttgaaaacaagtggtacgca
gattgcacaagtgccgggaggtcagatggatggctctggtgtggaaccaccacagactac
gacactgataagctctttggattctgtccattgaaatttgagggcagtgcaaacttatgg
actgaagatccattgaccaacgttctttaccagataaactccaaatctgctttgacttgg
caccaggcaaggaagagctgtcaacaacagaatgctgagctcctgagtgtcacagagatt
catgagcaaacatacctgacaggattaaccagttccttgacttcaggactctggattggg
cttaacagtctgagtttcaccactggttggcagtggagtggtggcagtccattccgatat
ttgaactggttaccaggaagcccatcaactgaacctggaaaaagctgtgtgtcactaaat
cctggaaaaaacgctaaatgggaaaacctggaatgtgttcagaaactaggctacatatgt
aaaaagggcaacaatactttgaatactttcattattccttcagaaagtgatgtgcctact
aagtgtcctagtcaatggtggccatatgcaggcaactgttacaagattcacagagaacag
aagaaaatccagagggatgctttgactgcatgtcggaaggaaggtggtgacctcgcaagt
atccacaccattgaggagtttgatttcattttctcccagctgggatatgagccaaatgat
gagttgtggattggcttaaatgacctcaagattcaaatgtactttgagtggagtgacggg
actcctgtaacatttaccaaatggcttcgtggagaaccaagccatgagaacaacaggcag
gaagactgcgttgtgatgaaagggaaggatgggtactgggcagatatggcctgtgagaag
ccacttgactacatctgtaagatgaaatcacaaacccaagctccagaaacagaggaagca
gaaacaggctgccggaaaggctggaaaaggcatggcttttactgctatatgattggacac
acactttcaacatttgcagaagccaaccaaacatgccaaaatgagaaagcttatttgaca
acggttgaagacagatatgaacaagcattcctgactagtttggttggattgaggcctgaa
aaatatttttggacaggactttcggatatacaaaacaaagggacctttcagtggacagtg
gaggaggaggtgcggttcacccactggaattcagatatgccagggcgaaaggcaggatgt
gttgccatgagaactgggcttgcagggggtttatgggatgtattgaaatgtgatgaaaag
gcaaaatttgtgtgcaagcactgggcagaaggagtaactcggccaccagagcccacgaca
acccccgagcccaaatgtccagaggagtggggttccaccagtaaaacaagcttgtgtttc
aagctgtttgcaaaaggaaaacatgagaagaaaacatggtttgaatctcgagatttttgt
agagctctgggtggagagctagccagcatcaacaacaaagaggagcagcaaatcatatgg
cgattaatcacgactagtggaaactaccatgaactgttttggcttggattgacgtatgta
agtccttcagaggggttcacctggagtgatggttctcctgtttcatatgaaaactgggct
tatggagaacctaataattatcaaaatgttgagtactgtggtgagctgaagggtgagcct
ggtatgtcctggaatgatattaactgtgaacatcttaacaactggatttgccaaatacaa
aaaggaaaaaccttacaaccagagccaacaccggctcctcaagacaatccaccagtcact
gaggatgggtgggttatttacaaagactaccagtattattttagcaaagagaaggaaacc
atggacaatgctcgagcattctgcaagaggaatttcggtgatctcgtttctattaaaagt
gaaagcgaaaagaagtttctatggaaatatataaacaggaatggtgtgcagacaccatat
tttattggtttattgatcagtttggataagaagtttacttggatggatggaagtaaagtg
gattatgtggcttgggccacaggtgaacccaattttgcaaatgaggatgaaaactgtgta
accatgtatacaacttcagggttttggaatgacattaactgtggctatccaaatgccttc
atttgccagcgacacaacagcagcattaatgccactgttatgcctactacgccccccagt
ccaggtggctgtaaagaaggttggagttggtacaataacaagtgtttcaaaatctttgga
tttgctgaagaagaaagaaaaaattggcaagaggcacgaaaaacttgcatcggattcaaa
ggaaatttggtatccatacgcaatgaaaaagagcaagcatttcttacccatctcatgaag
gactccacttttaatgcctggactgggctgaatgatgtgaattcagagcacacgttcctt
tggacagatgggcgaggagttcattatacaaactgggggaaaggttaccctggtggaaga
agaagcagtctttcttatgaagatgctgactgtgttgttatcattggaggcaaatcaaga
gatgcaggaatgtggatggatgatacctgtgacagtaagcgaggctatatatgccagact
gatcctgatccttctttgccttattctccaacaccaaccccaaagggtggctttattaaa
tatggtgaaagcagctattcactcatgaaattgaagttaacatggtatgatgccgagaca
tattgcaagaattccaattctctcatttctagtattctggatccctacagcaatgcattt
gcatggatgcagatgtatgcgtttaatgtacctgtgtggattgctctgaacagtaatttg
accaataatgaatatgtttggactgataaatggaggatgaggtacactaattgggcagcc
gatgagccaaagatgaaatcagcatgtgtttacctagatgttgatggttactggaagaca
tcaaactgcaacgaaagtttttactttctctgcaaaagatcagatgaaatacctgccact
gaacccccacaactgcctggcagatgtccagagtcagagcactctgcatggattcctttc
catggtcactgctactatattgagtcttcatttacaaggaactggggtcaagcttctcta
gagtgtcttcgaatgggttccactctggtttccattgaaaatgctgctgaatccagtttt
ctgtcatatcgggttgaacctcttaaaagtaaaaccaatttttggataggactgttcaga
aatgttgaagggatgtggctctggataaacaacaatccagtttcctttgtcaactggaat
actggagatccctctggtgaacgaaatgattgtgtagctgtagacgcatcttctgggttt
tggaataatattcactgttcttcctacaaaggatatatttgtaaaagaccaaaaagtaaa
gtaattttggtttctcaatatgtttataatgggatattcatgccgatggatttgcaaaac
tgcaatcgatttggacagcccatttacaaagccctactgtacaaggggaaagggtattgt
gtgctattgcataaccctgtctctctctccacttgtttcctaatgattttatttatagct
gactcaaggaagatggaaccttccaaaccatcttccaacgtggcaggagctgtggtcttt
gtgatcctcctgattctagtgggtgctggcattgctgcctatttcttgtataagaaaaga
cgtgtgcacctacctcaagagggtacctttgagaacactctctattttaacagccagtcc
agcccaggaaccagtgatatgaaagatctcatgagcaacattgaacagaatgaacacatg
gtcatctag
DBGET
integrated database retrieval system
