Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972493
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Entry
101972493 CDS
T10664
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101972493 (Ssrp1)
03036 Chromosome and associated proteins [BR:
iti03036
]
101972493 (Ssrp1)
Transcription factors [BR:
iti03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
101972493 (Ssrp1)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
101972493 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101972493
NCBI-ProteinID:
XP_005331653
UniProt:
I3MBS5
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMNPSYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKRAKMAKDRKSRKKPMEMKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSASRQLSESF
KSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccctggagttcaacgacatctaccaggaggtgaaaggctccatgaatgat
ggtcggctaaggctgagccgccagggtatcatcttcaagaacagcaagactggcaaagtg
gacaacatccaggctggggagttgacagagggtatctggcgccgcgtagctctgggacat
ggactgaaactcctcacaaagaacggccatgtgtacaagtatgatggcttccgagaatcg
gagtttgagaaactttctgatttcttcaaaactcactatcgccttgaactaatggagaag
gatctgtgtgtgaagggctggaattgggggacagtgaagtttggtgggcagctactttcc
tttgacattggtgaccagccggtctttgagatacccctcagcaatgtgtcccagtgtact
acaggcaagaatgaggtgacactggaattccaccagaatgatgatgcagaggtctctctc
atggaggtgcgcttttacgtccctcccactcaggaagatggtgtggaccctgttgaggcc
tttgcccagaatgtgctctcgaaggcagatgtaattcaggctactggagatgccatctgc
attttccgggagctacagtgtctgactccccgtggtcgttatgacatccggatctaccct
acctttctgcacctgcatggcaagacctttgactacaagatcccctataccactgtacta
cgcctctttttgttgccccacaaggaccaacgccagatgttttttgtgatcagcctggat
ccccccatcaagcagggccaaacccgttaccactttctgatcctcctcttctctaaggat
gaggacatttccttgacactcaatatgaatgaggaagaggtagagaagcgctttgagggg
cggctcaccaagaacatgtcaggatcactctacgagatggtcagccgggtcatgaaagca
ctggtgaaccgcaagatcacagtcccaggcaacttccaagggcactcaggggcccagtgc
atcacctgctcttataaggcgagctcgggactgttgtacccgctggagcgggggttcatc
tacgtccacaagccacccgtgcacatccgcttcgatgagatatcctttgttaactttgcc
cgtggcaccaccaccactcgctcttttgactttgaaattgagaccaagcagggcactcag
tacaccttcagcagcattgagagggaggagtatggaaagctgtttgattttgtcaatgca
aaaaagctcaacatcaaaaaccgaggattgaaagagggcatgaacccaagctacgatgac
tatgccgactctgatgaagatcagcacgatgcctacttggagaggatgaaggaggagggc
aagatccgggaagagaatgccaacgacagcagcgatgactcgggagaggaaactgatgag
tcattcaacccaggtgaagaggaggaagacgtggcagaggagtttgacagtaatgcctct
gccagctcctcgagtaatgagggtgacagtgaccgggacgagaagaagcggaaacagctc
aaaagggccaagatggccaaggatcgcaagagccgaaagaagcccatggagatgaagaag
ggcaaagaccccaatgcccccaagagacccatgtctgcatacatgctgtggctcaatgcc
agcagagagaagataaagtcagaccatcctggcatcagtatcacagatctctctaagaag
gcaggcgaaatctggaaggggatgtccaaagagaagaaagaggagtgggaccggaaggct
gaggatgccaggagggaatacgaaaaagctatgaaagaatatgagggaggccgaggcgaa
tcttctaagagggataagtcaaagaagaagaagaaagtaaaagtaaagatggaaaagaaa
tctacaccctctaggggctcatcatccaagtcagcatcaaggcagctaagcgagagtttc
aagagcaaagaatttgtgtccagtgatgagagctcttccggagagaacaagagcaaaaag
aagaggcggcggagtgaggattctgaagaagaagaactggccagtactcctcccagctca
gaggactcagcatcaggctccgatgagtag
DBGET
integrated database retrieval system
