Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972552
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Entry
101972552 CDS
T10664
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03030
DNA replication
iti03410
Base excision repair
iti03420
Nucleotide excision repair
iti03430
Mismatch repair
iti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101972552 (Pold1)
03410 Base excision repair
101972552 (Pold1)
03420 Nucleotide excision repair
101972552 (Pold1)
03430 Mismatch repair
101972552 (Pold1)
03440 Homologous recombination
101972552 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101972552 (Pold1)
03400 DNA repair and recombination proteins [BR:
iti03400
]
101972552 (Pold1)
Enzymes [BR:
iti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101972552 (Pold1)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
101972552 (Pold1)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
101972552 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
101972552 (Pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
101972552
NCBI-ProteinID:
XP_005341718
UniProt:
I3MHP4
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MDGKRQSGLGPGVPPKRARRGLWDEEEAPPPSQFEEDLALMEEMEAEQRLCEQEEEELQP
ALEGAAGGQFSEAIDSRWVRPSPPPLDPQTEPLIFQQLEIDHYVGPARPLPGRPVPPRGT
VPVLRAFGVTDEGFSVCCHVHGFAPYFYTPAPPGFGAEHLGDLQKELNAAISRDQRGGKE
LTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSF
APYEANVDFEIRFMVDADIVGCNWLELPAGKYLLRPEEKVTLCQLEADVLWSDVVSHPPE
GPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCA
PILGAKVQSYEQEEELLQAWSAFVRAVDPDVITGYNIQNFDLPYLISRAQTLKVQAFPFL
GRVAGLRSNIRDSSFQSKQMGRRESKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHF
LGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNTVEMARVTGV
PLSYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATL
DFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTADQFIRTPTGDEFVKTSVRKGLLPQILE
NLLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVT
GFGRQMIEKTKQLVESKYTVENGYSSDAKVVYGDTDSVMCRFGVSSVAEAMALGREAANW
VSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVA
NLVTASLRRLLVDRDPEGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHV
ELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQ
LAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAQRRSCCIGCRTVLNH
QGAVCKFCQSRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYM
RKKVRKDLEDQERLLRRFGPPGPEAW
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcagtcaggcctgggtcctggggtgcccccgaagcgggcccgtagg
ggactctgggatgaggaggaggcgcctccaccatcccagtttgaagaggacctggcactg
atggaggagatggaggcagaacagcggctgtgcgagcaggaggaggaggagctgcagccg
gccctagagggggccgcaggtgggcagttctctgaagccatagattcccgctgggtgcgg
ccttccccacctcccctggaccctcaaacagagcccctcatcttccagcaactggagatt
gaccattatgtgggcccagcgcgtcccctgccagggcggcctgtgccgccccgtggtact
gtgccagtgctccgcgcctttggggtcacagatgagggcttctctgtctgctgccatgtc
cacggcttcgcaccctacttctacaccccagcaccccctggttttggagccgagcacctg
ggtgacctacagaaggagctgaatgcagccatcagccgggaccagcgcgggggcaaggag
ctcacagggcctgccgtgctggccgtggagctgtgttctcgagaaagcatgttcgggtac
catggccacggcccatctccattcctgcgcatcaccttggcgctgccccgccttgtggct
cctgcccgtcgccttctggaacagggcatccgggtggcaggcctcggcacccccagcttt
gcgccctatgaggccaacgtggactttgagatccggttcatggtggatgcagacatcgtt
ggctgcaactggctagaactcccagctgggaaatacctcctgcggccagaggagaaggtt
acactgtgtcagctggaggcagatgtgctgtggtcagatgtggtcagtcaccccccagaa
gggccatggcagcgcattgcgcccctgcgtgtgctcagcttcgacattgagtgtgctggt
cgcaaaggcatcttccctgagcctgagcgggaccccgtgatccagatttgctctctgggc
ctgcgctggggtgagccagagcccttcctgcgtctggcgctcaccctgcggccctgtgct
cccatcctgggtgccaaggtgcagagctacgagcaggaagaggagcttctccaggcctgg
tctgcattcgtccgtgccgtggacccagatgtaatcaccggctacaacattcagaacttc
gacctcccctacctcatctcccgggcccaaaccctcaaggtacaggccttccctttcctg
ggccgcgtggccggactccgctccaacatccgggactcatcattccagtcaaagcagatg
ggccggcgagagagcaaggtggtcagcatggtgggccgtgtgcagatggacatgctacag
gtactgcttcgggagtataagctccgctcttacacactcaacgctgtgagcttccacttc
ctgggtgagcagaaggaggacgtgcagcacagcatcatcaccgacctacagaacgggaat
gaccagacccgccgccgcctggccgtctactgcctcaaggacgccttcctgcctctgcgg
ctgctcgagcgtctcatggtgctggtgaacactgtggagatggcgagagtcaccggtgtg
cccctcagttacctgcttagccgtggccagcaggtcaaggtcgtgtcccagctgctgcgg
caggccatgcgtgaggggctgctgatgcccgtggtgaaaacggagggcggcgaggactac
acgggagccacagtcatcgagcccctcaaagggtactacgatgttcccatcgctaccctg
gacttctcctcgctgtacccgtccattatgatggcccacaacctgtgctacaccacactc
ctgcggcccggggctgcccagaaactgggcctgaccgcagaccagttcatcaggacaccc
accggggacgagtttgtgaagacatctgtgcgcaaggggctgttgcctcagatcctggag
aacctgctcagtgcccggaagagggccaaggcagagttggcccaggagacagatcccctg
cggcggcaggtccttgatgggcggcagctggcgctgaaggtgagcgccaactccgtatat
ggcttcaccggtgcccaggtgggcaagctaccatgcttggagatctcacagagcgtcact
ggatttgggcgtcagatgattgagaaaaccaagcaactggttgagtccaagtacacggtg
gagaatggttacagttcagatgccaaggtggtgtatggtgacactgactcagtcatgtgc
cggttcggtgtctcctctgtggctgaggcgatggccctgggacgggaggctgcaaactgg
gtatccggtcacttcccaccacccatccggctcgagtttgagaaggtctacttcccctac
ctgcttatcagcaagaagcgctacgccggcctcctcttctcttcccgcccagatgcccat
gaccgcatggactgcaagggcctggaggctgtgcgcagggacaactgccccctcgtggct
aacctggtcactgcctcactgcgccgcttgcttgtggacagagaccccgagggtgccgtg
gcccacgcgaaggacgtcatctcagacctgctgtgtaaccgcatcgacatctcccagttg
gtcatcaccaaggagctgacccgcgccgcagccgactacgccggcaagcaggcccacgtg
gagctggccgagaggatgaggaagcgcgaccccgggagtgcacccagcctgggcgaccgt
gtcccctacgtgatcatcggagctgccaagggcgtggctgcctacatgaagtccgaggac
cccctgttcgtgctggagcacagcctgcccatcgacacgcagtactacctggagcagcag
ctggccaagcccctcctgcgcatcttcgagcccatcctgggcgagggccgcgcagaggcg
gtgctactgcggggtgaccacacgcgctgcaagacggtactcacgggcaaggtgggtggg
ctcctggccttcgcccagcgccgcagctgctgcatcggctgccgcacagtgctcaaccac
cagggagccgtgtgcaaattctgccaatccagggagtcagagctgtatcagaaagaggtg
tcccacctgaacgccctggaggagcgcttctcacgcctctggacccagtgccagcgctgt
cagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttctacatg
cgcaagaaggtacggaaggacttggaggatcaggagcggctgctgcggcgctttggcccc
cctggccctgaggcctggtga
DBGET
integrated database retrieval system
