Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972740
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Entry
101972740 CDS
T10664
Symbol
Nup133
Name
(RefSeq) nuclear pore complex protein Nup133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101972740 (Nup133)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101972740 (Nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101972740 (Nup133)
03036 Chromosome and associated proteins [BR:
iti03036
]
101972740 (Nup133)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101972740 (Nup133)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101972740 (Nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
FSAP_sig_propep
Motif
Other DBs
NCBI-GeneID:
101972740
NCBI-ProteinID:
XP_005320446
UniProt:
I3MDD1
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MFPAVPSLRTPGPGSRRGPLAGVGSGSTPRSTSRRGLSMGSGVGSPGLFSPAGRRSSLSS
RGTPTRTFPHHSVTESVNYDVKTFGSSLPVKVMEALTLAEVDDQLSVHIDEGGWACLVSK
EKLLVWKITLSPVTKLSVCKELQLPPSDFHWSADLVALSFSAPSGEAHSIQAVAVMVATR
EGSIRYWPSLAGEDTYTETCVDLGGDKICRFLTAVKGGSFVLSSAGSQLIRLIPESSGKI
HQHVLPQGQGVLSGIGRRVSSLFGILSPSSDLMLAGVFWDRESSSFYSLTSSNISKWELD
ESSEKQAYSWDVHRALKENVTDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLLILAAAWH
PADNPCLVYYSLVTVEDNGCQMSDAITVEVTQYNPPFQSEDLVICGLMVPDSSSQTAYLY
TENAVHVCTTGTGKFSLPRERISFNSQGDGILGAGSCGGIPLLFSRNSGLVSITCRESVS
LLAEELEESLASSVAGPSSDSMVFETTMKNGTVAQEDRTKLLKAAFLQYCRKDLGHAQMT
VDELFSSHSDLDSDSELDRAVTQISVDVVDDYPASDPRWAESVPEEAPGLSNTSLIILHQ
LEDKMKAHGLLVDFLHQVGLFGRLRTSPVRGTPMATRQLLCEHAEKLSAAIALKNHHSRR
PDLVNTAIQAALSKREREIPPSLTPADVFFREVSQVDTICECLLEHEEQVLRDMALDSLE
WAEVAIDVNTVLKDMLQAASHYRQNRSSFYKREDAGGKEPEYVPWTATSGPAGIRTTIVR
QHGIILKIVYPQADSNLRNILMEQLVALIDCFLDGYVSQLKSLDRSSDQERYNSLEMEYL
QRRSDLLSPLLTLGQYSWAASLAEKYCDFDILVQLCEQTDNQSRLQRYMTQFADQNFSDF
LFRWYLEKGKRGKLLSQPVSQHGQLASFLQAHEHLSWLHEVNSQELEKAHATLLGLANME
TRYFAKKKTLLGLSKLAALASDLSEDVLQEKIEAMAEQERFLLHQETLPEQLLAERQLRL
GAMPVLTAPQLISLYICEENRRANEYDFKKALDLLEYIEEDEDVNIDDLKLEILCRALQR
DDWSSSDGKDDPIEVSKDSVFVKILQKLLKDGVRLSEYLPEVQGLLQADQLGSLKSNPYF
EFVLKANYEYYVQGQM
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgttcccggccgtcccttcactgcggaccccgggtccagggtcccgaaggggcccgctg
gccggtgtcgggtcgggctccacaccccgttcgacgagcaggaggggcctgtccatgggc
tctggggtcggcagccccgggctcttctcgcccgcaggccggcggagctcgctcagctca
cgaggaacacctacacggacattcccgcaccactccgtaaccgagtctgtgaactacgat
gtgaagacgttcggatcatctctccctgttaaggtcatggaggccctgaccctggcagag
gttgatgaccagctgtctgttcacatagatgaaggtggctgggcttgcctagtcagcaaa
gagaaactgcttgtttggaagattactctgtcacctgtcaccaagttatctgtttgcaaa
gaactccagctgccacctagcgatttccactggagtgctgacctggtggccctgtccttc
tccgctccctcaggtgaagcgcattccattcaggccgttgctgtcatggttgccactaga
gaagggtccatccgctactggccaagtctcgctggggaggacacctacacagaaacatgc
gtggacttgggaggggacaagatctgcaggttcctcacggcagtcaagggaggaagcttc
gtcttgtcctctgcagggagccagctaattcggttgatacctgaaagctcggggaagatc
catcagcatgtcttgccacaggggcaaggcgtgctttcagggattggtcggagggtttcc
tccctttttggaattttgtctcctagtagtgatctcatgcttgcaggtgttttctgggac
agagaaagctccagcttctacagcctcaccagctcaaatatcagtaaatgggagttggat
gaatcatcagaaaagcaggcatacagctgggatgtgcaccgagccctgaaggagaacgtc
accgatgctatctggggatctgaaagtaactatgaagctattaaagaaggggtcaacatt
cggtatttggacttgaagcaaaactgtgatgggctcctgattttggcagctgcgtggcat
cctgcagacaacccctgcctggtctattactcccttgtgacagtggaagataacggctgc
caaatgtcagatgcaattacagtagaagtcactcagtacaatccaccttttcagtctgaa
gacttggtcatatgcgggttgatggtcccagactcttcaagccagaccgcctacctgtac
actgagaatgctgtccacgtgtgcaccactgggactgggaagttttctctccctcgagag
agaatcagcttcaattcacaaggagatggcatcctgggcgcgggctcctgtggcggcatt
cccctcctgttctctagaaacagcgggctggtgtccatcacttgcagggagagtgtgtcc
ctgctggcagaagagctggaggagtcgttggcgtcttcagttgctggaccaagcagtgat
agcatggtctttgagactaccatgaagaatgggacagtagcccaggaagacaggaccaag
ctgctgaaagctgcttttctgcagtactgcaggaaagacttgggtcatgctcaaatgacg
gttgacgagctgttttcctcccactccgacttggattctgactctgagctggacagggct
gttacccaaatcagtgtagatgtggtggatgactacccagcctctgaccctcggtgggct
gagtctgttcctgaagaggcacctgggctcagcaacacctccctgatcatcctccaccag
ctggaagacaagatgaaagcccatggcctcctggtggacttcttacaccaggttggccta
tttgggcgtcttcgcacatctccagtcagagggacaccaatggcaacccgccagctgctc
tgtgaacacgcggaaaagctgtctgcagcaattgctctcaagaaccaccactcacggcgg
ccagacctcgtgaacactgccatccaggcagcgctgagcaagagggagcgggaaatccca
cccagcctgacacctgcagatgtcttcttccgtgaggtgtcccaggtggataccatctgc
gaatgtctgctggagcacgaggaacaggtcctgagggacatggcgctggactctctcgag
tgggcagaggtggccattgacgtcaacactgttctcaaggacatgctgcaggctgctagt
cattatcgccaaaatcgaagctccttttacaagagagaagacgcaggaggaaaagaaccg
gaatatgtcccttggacagcaacaagtgggcccgctggcattcgaaccactatcgtgcgc
cagcacgggatcatcctgaagattgtctacccgcaggcggacagcaacctccgcaacatc
ctaatggagcaactggttgcactgattgattgcttcctagatggctatgtttcacagctg
aagtctctggataggtccagtgaccaggagagatataacagcctggaaatggagtaccta
cagagacgctcagacctcttgtctcctctactcacgctgggccagtactcatgggctgct
tctctagcagagaagtactgtgactttgacatcttagtacagttgtgtgagcagactgac
aaccagagcaggctccagcgctacatgactcagtttgctgatcagaatttttcagacttt
ctcttccgttggtatctggagaaaggaaagcggggcaagttgttgtctcagcctgtttct
caacatggacagttggcaagttttttgcaagctcatgaacatctcagctggctacacgag
gttaatagccaagagctggaaaaggctcatgcaacgcttctgggtttggcaaatatggag
actcgttattttgccaagaaaaaaacacttcttggcttgagtaaattggctgcattagct
tcagacctttcagaggatgtactgcaagaaaaaattgaagcaatggctgagcaggagcgc
ttcctgctgcaccaggagaccctgcctgagcagcttctggcagagagacagctgcgcctc
ggtgccatgcccgtgctgacagctccacagctcatcagtctgtacatctgtgaagaaaac
agaagagccaacgagtatgatttcaagaaggctctggacttgctcgagtatatcgaagag
gatgaagatgtgaacattgacgacctgaagctggaaatcctctgcagagccctgcagagg
gacgactggtccagttcagatggtaaagatgatccaatcgaagtgtctaaagacagtgtc
tttgtgaaaatcctgcagaaacttttaaaagatggcgtccggctcagtgagtacctgcca
gaggtgcaaggcctgctgcaggcagaccagctgggaagcctcaagtccaacccgtacttt
gagtttgttttgaaagcaaattatgaatattacgtccagggacaaatgtaa
DBGET
integrated database retrieval system
