Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101972856
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Entry
101972856 CDS
T10664
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03082
ATP-dependent chromatin remodeling
iti05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101972856 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101972856 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101972856 (Arid2)
03021 Transcription machinery [BR:
iti03021
]
101972856 (Arid2)
03036 Chromosome and associated proteins [BR:
iti03036
]
101972856 (Arid2)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Helix-turn-helix
ARID
101972856 (Arid2)
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101972856 (Arid2)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
101972856 (Arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
101972856
NCBI-ProteinID:
XP_021581784
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGV
FDDTLGSFSTVFGEEWKEKTDRDFVKFWKDIVDDNEVRDLISDRNKSQEGTSGEWIWESL
FHPPRKLGINDIEGQRVLQIAVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQ
LGLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGV
LICEYVDQDSYREIICHLTLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCL
VSMDIQMFGPDALAAVKLVEHPSSNHQVLSEIRPQAIEQVQTQTHVASSPASRAVVAQHV
APPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYK
CLRTVFPNHTVKRVEDSSNNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTPVVRVDSVPD
VSPTPSPAGIPHGSQTVGNHFQRTPVTNQSSNLTATQMSFPVQGVHTVAQTVPRIPPNPS
LHTHQQQNAPVTVIQNKTPISCEVVKATVIQNSVPQTAVPVSIAVGGGPTQSSVVQNHST
GPQPVTVVNSQTLLHHPSVIPQPSPLHTVVPGQIPSGTPVTVIQQAVPQSHIFGRVQNIP
ACTSTVSQGQQLITTSPQPVQSSSQQTSAGSQPQDTVIIAPPQYVTTSASNIVSATSVQN
FQVATGQMVTIAGVPSPQPSRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIV
SQPTQQGQTYAPAIHQIVLANPAALPAGQTVQLTGQPSITPSSSPSPVPTTNNQVPTAMP
SSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQTNAGV
GQPASGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQAAGF
GVQGQTPAQQLLVGQQNVQLVQSAMPPTGGVQTVPISNLQILPGPLISNSPATIFQGTSG
NQVTITVVPNTSFATATVSQGNATQLIAPAGITMSGTQAGVGLQVQTLPATQASPAGQSS
CTTATPPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGTTNTSNGDSKENEMQ
VGSLLNGRKYSDSSLPPSNSGKIQSEVNQCSLISNGPSLELGENGASGKQNSEQMDIQDI
KCDLKKTLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQGTLDATQQDTAKG
DQLERISNGPVLTLGGSPSMSSIQEASNAAIQQFSGTDLPNGPLTSSLNSDVPQQRPSVV
VSPHSTTSVIQGHQIIAVPHSGSRVSHSPVLSSDVRSTNGTAECKTVKRPAEDNDRETVA
GIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQQPPTYIQNV
VPQNTPMPPSPAVQVQGQPNSSQPSPFSASSQHADPMRKPGQNFMCLWQSCKKWFQTPSQ
VFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQA
GNQKSSTKQPAVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHI
RLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQE
KDSEMLQ
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggactttaattcgccaaatgattataataaattggtgctttcactgttatctggactc
ccaaatgaagtggactttgctattaatgtatgcactctcctatccaatgaaagcaagcac
gtcatgcaacttgaaaaagacccgaaaatcatcactttattacttgctaatgctggggtg
tttgatgacactttaggatccttttctactgtatttggagaagaatggaaagagaagact
gatagagactttgttaagttttggaaagacattgttgatgataatgaagtacgtgatctc
atttctgatagaaacaagtctcaggaaggtacatcaggagaatggatttgggaatcttta
tttcatccacctcgaaagctgggcattaatgatattgaaggacagcgggtacttcagatt
gcagtgattttgcgaaatctttcctttgaagagggcaatgttaagctcttggcagctaat
cgtacctgtcttcgtttcctattactttctgcacatagtcattttatttctttaaggcaa
ttaggccttgacacattaggaaatattgcagctgagcttttattggaccctgttgatttc
aaaactactcatctgatgtttcatactgttacaaaatgcttaatgtcaagggatagattt
ttaaagatgaggggcatggaaattttgggaaatctttgcaaagcagaagataatggtgtt
ttaatttgtgaatatgtggatcaagattcatatagagagatcatttgtcatctcacttta
cctgatgtgctgcttgtaatctcaacacttgaggtgctatacatgctcactgaaatggga
gatgttgcttgcacaaaaattgcaaaagtagaaaagagcattgacatgttagtttgtctg
gtttctatggatattcagatgtttggccctgatgcactagcagcagtaaaactcgtcgaa
catccaagttccaatcaccaagttttatctgaaattaggccacaagctatagagcaagtc
caaacccagacccatgtagcatcatccccagcttccagagcagttgtagcacaacatgtt
gctccacctccaggaatagtggaaatagatagtgagaagtttgcttgtcaatggctaaat
gctcattttgaagtaaatccagattgttctgtctctcgagcagaaatgtattccgaatac
ctctcaacttgtagtaaattagctcgtggtggaatcctcacatcaactggattttataaa
tgtcttagaacagtttttccaaaccatacagtgaagagagtggaagattccagtaacaat
gggcaggctcatatccatgtggtaggagtaaaacggagggctatcccacttcccattcag
atgtactatcagcagcaaccagtttctactcctgttgttcgtgttgattctgttcctgat
gtatctccaactccttcacctgcaggaatccctcatggatcacaaactgtaggaaatcat
tttcagaggactcctgttaccaaccaatcttcaaatttgactgcaacacaaatgtctttt
ccagtacaaggtgttcatactgtggcacagactgttccaagaattccaccaaatccttca
cttcatacccaccagcagcaaaatgctccagtgactgtcattcaaaataaaactccaatt
tcttgtgaagtggtcaaggctactgtaatccagaattctgtaccccagacagcagttcct
gttagtattgctgttggaggaggacctacacagagttctgtggttcagaatcatagtaca
gggccacaacctgttacagttgtgaattctcagacattgcttcaccacccatctgttata
ccacaaccgtctccattacacacggtggtaccaggacaaataccttcaggcactcctgtt
acggtaattcaacaagcagtcccacagagtcatatatttggcagagtacagaacatacca
gcatgtacttctacagtttcacagggtcaacagttaatcaccacatcaccccaacctgtg
caatcttcatctcaacagacatcagctggtagccagccacaagacactgttatcatagca
cccccacagtatgtaacaacttctgcatccaacattgtctcagcaacttcagtacagaat
tttcaggtagctacaggacaaatggttaccattgctggtgtcccaagtccacaaccctca
agggtaggatttcagaacattgcaccaaaacctctcccttctcagcaagtttcatcaaca
gtggtacaacagcctattcaacaaccacagcagccaacccaacaaagtgtagtgattgta
agccagccaactcaacaaggtcaaacttatgcaccagccattcaccaaattgttcttgct
aatccagcagctcttccagctggtcagacagttcagctaactggacaaccaagcataact
ccatcttcttcaccatcacctgtcccaactaccaataaccaagttcctactgccatgcca
tcttcttccacccctcaatcacagggaccacctcctactgtcagtcaaatgctatctgtg
aaaaggcagcaacagcagcagcattcaccagcacccccaccacaacaggtacaggtacaa
gttcagcagccacaacaagtacagatgcaagttcagcctcagcaaacaaatgcaggagtt
ggtcagcctgcttctggtgagtcaagtctgataaaacagctgctacttccaaagcgtggt
ccttcaactccaggtggtaaacttatcctcccagctccacagattcctccccctaataat
gcaagagctcctagccctcaggtggtctatcaggtggctaataaccaagcagctggtttt
ggagtccaggggcaaactccagctcagcagctgttggttgggcagcaaaatgttcagttg
gtccaaagtgcaatgccacccacagggggagtgcaaactgtgcccatctcaaacttacaa
atattgccaggaccactgatctcaaatagcccagcaaccattttccaaggaacttctggc
aaccaggtaaccataacagttgtgccaaatacaagttttgcaactgcaactgtgagtcag
ggaaatgcaactcagctcattgctccagcgggaattacgatgagcggaacacaggcagga
gttggacttcaggtacaaacacttccagccactcaagcatctccagctggacaatcatca
tgtactactgctactcccccattcaaaggtgataaaataatttgccaaaaggaggaggaa
gcaaaagaagcaacaggtttacatgttcatgaacgtaaaattgaagtcatggaaaaccca
tcctgccgacgaggaaccacaaacaccagcaatggggattcaaaagaaaatgaaatgcag
gtgggaagtcttttaaatgggagaaagtacagtgactcaagtctacctccttcaaactca
gggaaaattcaaagtgaggtcaatcagtgctcactaatcagtaatggaccatcattagaa
ttaggtgagaatggagcatctggaaaacagaactcagaacaaatggacatacaggatatc
aaatgtgatttgaaaaaaaccctagtaaatggaatctgtgattttgataaaggagatggt
tctcatttaagcaaaaacattccaaatcacaaaacttccaatcatgtaggaaatggtgag
atatctccagtggaaccacaaggaactttagatgccactcagcaagatactgccaaaggt
gatcagctagaaagaatttctaatggacctgtattaactttgggtggttcaccatctatg
agcagtatacaggaggcttcaaatgcggcaatacagcaatttagtggtactgatttgcct
aatggacctctaacttcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagtt
gtctcaccacattctacaacctctgtcatacaggggcatcaaatcatagcagttccccac
tcaggatcaagagtgtcccattctcctgtcctatcatcagatgttcggtctacaaatggc
acagcagaatgcaaaactgtaaagaggccagcggaggataatgatagggaaacagttgca
ggaattccaaataaagtaggagttagaattgttacaatcagtgaccccaacaatgctggc
tgcagtgcaacaatggttgctgttccagcaggagcagatccaagcactgtagctaaagta
gcaatagaaagtgctgttcagcaaaagcagcagcagccaccaacatatatacagaatgtg
gtcccacagaacactcctatgccaccttcaccagctgtacaagtgcagggccagcctaac
agttctcagccttctccattcagtgcatccagtcaacatgcagatccaatgagaaaacct
gggcagaacttcatgtgtctgtggcagtcttgtaaaaagtggtttcaaacaccctcacag
gttttctaccacgcagctactgaacatggaggcaaagatgtatatccagggcagtgtctt
tgggaaggttgtgagccttttcagcgacagagattttcctttataacccacttacaggat
aagcactgttcaaaggatgccctacttgcaggattaaaacaagatgagccaggacaagca
ggaaatcaaaaatcttctaccaagcaaccagctgtagggggcacaagctcaactcctaga
gcacaaaaggccattgtgaaccatcccagtgctgcactcatggctctcaggagaggatca
agaaaccttgtctttcgagattttacagatgaaaaagagggaccaataactaaacacatc
cgactaacagctgccttaatattaaaaaatattggtaaatactcagaatgtggtcgcagg
ttgttaaagagacatgaaaacaatttatcagtgctagccattagtaacatggaagcttcc
tccacccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaacaagaa
aaagactcagaaatgctgcagtga
DBGET
integrated database retrieval system
