Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973079
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Entry
101973079 CDS
T10664
Symbol
Cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101973079 (Cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101973079 (Cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
101973079 (Cntn1)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
Contactins
101973079 (Cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
Others
101973079 (Cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_5
Sp38
C2-set_2
Motif
Other DBs
NCBI-GeneID:
101973079
NCBI-ProteinID:
XP_021587890
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MKMWLLVSHLMIISFTTCLAEFTWHRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGK
VSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGTYYCLASNNY
GMVRSTEAILSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVF
ITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNI
QLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCIATGKPIP
TIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPM
KKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
VYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVW
SFNGYVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGKNRKNGEKSMADPFLPVCASLPPTW
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtggttgctggtcagtcatctgatgataatctcttttacaacatgtctagca
gagtttacatggcacagaaggtatggtcatggagtttctgaggaggacaaaggatttgga
ccaatttttgaggagcaaccaatcaataccatttatccagaagaatcactggaaggaaaa
gtttcactaaactgtagggcacgagccagcccttttccagtttacaaatggagaatgaat
aacggagatgttgacctgacaagtgaccgatacagtatggtgggaggaaaccttgtcatc
aacaaccctgacaaacagaaagatgctggaacgtactactgtttggcatcaaataactat
gggatggtcagaagcactgaagcaatcctgagctttgggtatctggatcctttcccaccc
gaggaacgccctgaggtcagagtgaaagaaggaaaaggaatggtacttctctgtgacccc
ccataccattttccagatgatcttagctaccgctggcttctaaatgaatttcctgtattt
atcacaatggataaacgaaggtttgtgtctcagacaaatggcaatctctacattgcaaac
gttgaggcatctgacaaaggcaattattcctgctttgtatccagtccttcaattacaaag
agtgtgttcagcaaatttatcccactcattccaatacctgaacgaacaacaaaaccatat
cctgctgatattgtagttcagttcaaggacatatatgcattgatgggtcaaaatgtgact
ttagagtgttttgcacttgggaatcctgttcctgatatccgatggcggaaggttctagaa
ccaatgccaagcactgctgagatcagcacctctggagctgtcctcaagatcttcaatatt
cagctagaagatgaaggcatatatgaatgtgaggctgagaatattagaggaaaggataaa
caccaagcaagaatttacgttcaagcatttcctgagtgggtagaacatatcaatgacaca
gaggtggacattggcagtgatctctactggccttgtatagccacagggaagcccatccct
acaatccggtggctgaaaaatggatatgcgtatcataaaggggaactgagactatatgat
gtgacttttgaaaatgctggaatgtatcagtgcatagctgaaaacacatatggagccatt
tatgcaaatgctgagttgaaaatcttggctttggctccaacttttgaaatgaatcctatg
aagaaaaagatcctggctgctaagggaggaagggttataattgaatgcaaacctaaagca
gcacctaaaccaaagttctcctggagtaaaggaacagagtggcttgtcaacagtagcaga
atactcatttgggaagatggtagcttggaaatcaataacattacaagaaatgatggtggt
gtctatacatgctttgcagaaaataatagagggaaagctaatagcactgggactcttgtc
atcacagatcccacacgaatcatattggccccaattaatgctgatatcactgtcggagaa
aatgccaccatgcagtgtgctgcgtcctttgaccctgccttggacctcacatttgtctgg
tccttcaatggctatgtgattgactttaacaaagagaatatccattaccagaggaatttt
atgctggatgccaatggtgagctgctcattcgaaatgcccagctgaaacatgccggaaga
tatacatgtaccgctcaaacaattgtggacaattcttcagcttcagctgaccttgttgtt
cgaggtaaaaacagaaaaaatggagagaaaagcatggcggatccctttctccccgtctgt
gcaagcctgcctccaacctggtga
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