Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973134
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Entry
101973134 CDS
T10664
Symbol
Casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101973134 (Casc3)
03015 mRNA surveillance pathway
101973134 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101973134 (Casc3)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101973134 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101973134
NCBI-ProteinID:
XP_005321869
UniProt:
I3M7T7
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSLARGGGSCSGSAGGGGSGSLPSQRGGRGGALH
LRRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEAEEGEYSEEENSKVELKSEGN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEIRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPNKPHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTSFRPMEAGGQHGGRSGETVKHETNYRSRRLEQSSVR
DPSPEADAPVLGSPEKEEAVTETSAVVPDTAPPAPDRPIEKKSYSRARRTRTKVGDAVKA
AEEVPPPPEGLTSAPPVSETTPPPSTKTGNWEAPVDSAAGGLEQDVAQLSIAEQNWSPGQ
PAFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggatacggaagacgaagaatctggtgct
tcgggctccgacagtggcggctccctagcgcggggcggcgggagctgcagcgggagcgct
ggaggcggcggcagcggctctctgccttcccagcgcggtggccgcggcggggccctccat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtccgagtgtgagagtgaa
gatggcatggaaggtgatgctgttctctccgactatgaaagtgcagaagactcagaagct
gaagaaggggaatacagcgaagaagaaaactccaaagtggaactgaaatcagaaggtaat
gatgctgcaaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
accgtgactggagagaggcaaagtggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaatccagca
tacataccccggaaagggctcttttttgagcacgaccttcgagggcaaactcaggaggag
gaaatcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgttgggagcat
gacaagttccgcgaagatgagcaggctccaaagtcccgacaggagcttattgctctttat
ggctatgatattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cctcgatttgggagtcctccccaaagagatccaaactggattggtgagcgtccaaacaag
ccccatcgccatcagggtcctgggggtaccctaccaccaaggacatttattaacaggaat
gcagcaggtactggccgcatgtctgcacccaggaattactctcgatctgggggcttcaag
gaaggtcgtactagttttcggcctatggaggctggtgggcagcatggtggccggtccggt
gagactgttaagcatgagactaattaccggtcacggcgcctggagcagtcttctgtgagg
gatccatccccagaagcagatgctccagtgcttggcagtcctgagaaagaagaggcagtc
acagagacatcagctgttgttcctgacacagcaccaccagcccctgacaggcctattgag
aagaaatcttattcccgggcaagaagaacccgaaccaaagttggagatgcagtcaaagct
gctgaggaggttccccctccacctgaagggctgacctcagcacctccagtctcagaaacc
acccctcctccatctactaagacagggaactgggaagctccagtagattctgctgcaggt
ggactagaacaagatgtggcacaactaagtatagcagaacagaattggagtccaggacaa
cctgcattcctacaaccacgggagcttcgaggtatgccgaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagccaaa
cgctattcatcccagcggcagagacctgtgccagagcctcctgcccctcctgtgcatatc
agtatcatggagggacattactatgatccactgcagttccaaggaccaatctatacccat
ggtgacagtcctgccccactgcccccacagggcatgattgtacagccggaaatgcacctt
cctcacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctac
ccaccaccagtgtccatgtctccaggacagccaccaccccagcagttgcttgctcctact
tacttttctgctccaggagtcatgaactttggtaatcccagttacccttatgctccagga
gcactgcctcccccaccacctcctcatctatatcctaatacacaggctccatcacaggta
tatggaggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccattaagccccctccacctgaggttgtaagcaga
ggttccagttaa
DBGET
integrated database retrieval system
