KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973170
Entry
101973170         CDS       T10664                                 
Symbol
Grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
  KO
K05214  glutamate receptor ionotropic, NMDA 3B
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04020  Calcium signaling pathway
iti04024  cAMP signaling pathway
iti04080  Neuroactive ligand-receptor interaction
iti04082  Neuroactive ligand signaling
iti04724  Glutamatergic synapse
iti05017  Spinocerebellar ataxia
iti05020  Prion disease
iti05030  Cocaine addiction
iti05031  Amphetamine addiction
iti05033  Nicotine addiction
iti05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    101973170 (Grin3b)
   04024 cAMP signaling pathway
    101973170 (Grin3b)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    101973170 (Grin3b)
   04082 Neuroactive ligand signaling
    101973170 (Grin3b)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    101973170 (Grin3b)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    101973170 (Grin3b)
   05020 Prion disease
    101973170 (Grin3b)
  09165 Substance dependence
   05030 Cocaine addiction
    101973170 (Grin3b)
   05031 Amphetamine addiction
    101973170 (Grin3b)
   05033 Nicotine addiction
    101973170 (Grin3b)
   05034 Alcoholism
    101973170 (Grin3b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:iti04040]
    101973170 (Grin3b)
Ion channels [BR:iti04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   101973170 (Grin3b)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 101973170
NCBI-ProteinID: XP_005332007
UniProt: A0A287CTX7
LinkDB
Position
Unknown
AA seq 1031 aa
MEFVRALWLGLALGLAPGSARGHPQPCGVLARLGSSVRLGALLPRASVARARARTALARA
ALEPPLPHNLSLELVAAAPPARDPASMARVLCQKLASPGVAAWLAFPESRPELLQLHFLA
AATETPVLSVLRREARAPLGAPTPFHLQLDWASPLETLLDVLVSLLQAHGWEDVGLVLCR
VRDPAGLVALWTSRAGWAPRILLDLSRPDVGDVGLRTRLAPLGTPGGGESPVPVAVLLGC
DTTHAPQVLQAAPPGPRWLLGTPLPAEALPTAGLPPGLLALGEVARPSLEATIHDAVELV
ARALGSAARVQPERAHLLAMANCEDREPAGPESPGRFLAQFLANTSFQGRTGPVWVTSTS
QVHLSRSFKVWSLLRDPLGAPAWATVGSWRDGQLDLEPGGTASQLPPPTGARARPKLRVV
TLVEHPFVFAREPDEDGQCPAGQLCLDPGTNDSAMLDALFAALANGSVPHTLRKCCYGYC
IDLLERLAEDAPFDFELYIVGDGKYGALREGRWTGLVGDLLAGRAHMAVTSFSINSARSQ
VMDFTSPFFSTSLGILVRARDTASPIGAFMWPLHWSMWLGVFAALHLTALFLTLYEWRSP
YGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLLVLSSY
TANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVRESSAEAYIKASFPEMHAHMRRH
SAPTTPDGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQN
SPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMGIYHFSGLFVLLCL
GLGSALLSSLCEHVFFRLVLPRIRRGSRLQYWLHTSQKIHRALNTDRPEGQRERLEPEPS
GSEQQQEQQDTSAYPEGPGRWKRVRRAVGKERRVRFLLEPGMAGAQGGAEAEPGTPESPV
WICSNGPPPTAAPATSPSGELEELERHIEAVRERLRRALMQRGELLVRLGDGARHRPLRL
LQAQAAPEDAP
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggagtttgtgcgggcgctgtggctcggcctggcgctggggctggcgcccgggtccgcc
cgcggccacccgcagccgtgtggtgttctggcccgcctggggagctctgtgcgcctgggc
gccctcctgcctcgtgcatccgttgcccgcgcccgcgcccgcaccgcgctggcccgggct
gccctggagccgcctctgccgcacaacctcagcctggagcttgtggccgccgcgccccct
gcccgcgaccctgcctcgatggcccgtgtcctgtgccagaagctggcctcgccgggcgtg
gcagcctggctggccttccccgagtcgcgaccggagctgctgcagctgcacttcctggcc
gctgccacggagaccccggtgctcagcgtgctgcggcgggaggcgcgcgcgcccctcggc
gccccgaccccgttccacctgcagctggactgggccagccccctggagacgctgctggac
gtgctggtgtccctgctgcaggcgcacggctgggaggacgtcggcctggtgctctgccgt
gtccgggatcccgctggcctggtggccctctggacaagccgggctggctgggcaccgagg
atcctgctggacctgagtcggccggacgtgggggatgtggggctgcgcacacgcctggcc
ccactggggacaccagggggaggtgagtccccagtccccgtggccgtcctcctcggctgt
gacaccactcacgctccacaggtgctgcaggctgcccctcctgggccgcgctggctgctg
ggcaccccactgcctgccgaggccctgcccacggctggcctgccacctgggctgctggcc
ctgggcgaggtggcccgaccctcactggaggccactatccacgacgccgtggagctggta
gcccgggcactgggtagtgcagcccgtgtgcagccagagcgggcacacctcctggccatg
gcgaactgcgaggaccgggagccagcaggaccagagtcccccgggcgcttcttggctcag
ttcctggccaacacgtccttccagggccgcacggggcccgtgtgggtgaccagcacctcg
caggtgcacctctctcgcagcttcaaggtgtggagccttctccgggacccactgggcgcc
ccagcctgggccacggtgggcagctggcgggacgggcagctggatttggagccagggggc
actgcttcccagctcccacccccaacaggtgccagggcccgacccaaattgcgtgtggtg
acactggtggagcacccgtttgtgtttgcccgtgagccggacgaggacgggcagtgcccg
gcagggcagctgtgcctggaccctggcaccaatgactcggctatgctggacgctctgttt
gcagcgctagccaatggctcagtgccccacaccctgcgcaaatgctgctacggctactgc
attgacctcctggagcggctggctgaggacgcgcccttcgactttgagctgtacatcgtg
ggcgatggcaaatacggcgccctgcgggagggccgctggaccggcctggtgggtgacctg
ctggctggcagggcccacatggcggtcaccagcttcagcatcaactcggcacgctcgcag
gtcatggacttcaccagccctttcttctctaccagcctgggcatcctggtgcgggcgcgg
gacacggcctcacccatcggtgccttcatgtggccgctgcactggtccatgtggctgggg
gtcttcgcggctctgcacctcacggcgctcttcctcaccctgtacgagtggcgcagcccc
tacgggctcacgccccgcgggcgcaaccggggcacggtgttctcctactcctccgccctc
aacctgtgctatgccatccttttcggacgcactgtctccagcaagacccccaagtgcccc
acggggcgcttcctcatgaacctctgggccatcttctgcctgctggtgctgtccagctac
acggccaacctggccgcggtcatggtcggagacaagaccttcgaggagctgtcagggatt
cacgaccccaagctgcaccacccgtcgcagggcttccgcttcggcaccgtgcgggagagc
agcgctgaggcctacatcaaggccagcttccccgagatgcacgcgcacatgcggcgccac
agcgcgcccaccacgcccgacggcgtcgccatgctcacgagcgacccccccaagctcaac
gccttcatcatggacaagtcgctcctggactatgaggtctccatcgacgccgactgcaaa
ttgctgaccgtgggcaagcctttcgccatcgagggctacggcatcggcctgccccagaac
tccccgctcacctccaacctgtccgagttcatcagccgctacaagtcctcggggttcatc
gacctgctccacgacaagtggtacaagatggtgccttgcgggaagcgggttttcgcggtt
actgagaccctccagatgggcatctaccacttctcgggtctcttcgtgctgctctgcctg
ggcctgggcagcgccctgctcagctcgctgtgcgagcacgtcttcttccgcctggtgctg
ccgcgcatccgcaggggcagcaggctgcagtactggctgcacaccagccagaaaattcac
cgggctctcaacacagaccggccggaagggcagagggagaggctggagccagagcccagt
ggctcggagcagcagcaggagcagcaggacacctcagcttaccccgagggtccagggcgc
tggaaacgagtgcgccgggctgtgggcaaggagcgtagggtgcgcttcctgctggagcca
gggatggcaggcgcccagggaggggcggaggcggagcctgggacccctgaaagcccagtc
tggatttgttccaacgggccaccgcccactgccgcgccagcgacctcaccgagtggcgag
ctggaagagctggagcggcacatagaggccgtccgcgaaaggctccgaagagctctgatg
cagcgtggggagctcctagttcgacttggggacggcgctcgccaccggccactgcgcctg
ctccaagcccaagccgcacctgaggacgccccgtga

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