KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973284
Entry
101973284         CDS       T10664                                 
Symbol
Tubb4b
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04145  Phagosome
iti04517  IgSF CAM signaling
iti04540  Gap junction
iti04814  Motor proteins
iti05010  Alzheimer disease
iti05012  Parkinson disease
iti05014  Amyotrophic lateral sclerosis
iti05016  Huntington disease
iti05020  Prion disease
iti05022  Pathways of neurodegeneration - multiple diseases
iti05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    101973284 (Tubb4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101973284 (Tubb4b)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    101973284 (Tubb4b)
  09142 Cell motility
   04814 Motor proteins
    101973284 (Tubb4b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101973284 (Tubb4b)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101973284 (Tubb4b)
   05012 Parkinson disease
    101973284 (Tubb4b)
   05014 Amyotrophic lateral sclerosis
    101973284 (Tubb4b)
   05016 Huntington disease
    101973284 (Tubb4b)
   05020 Prion disease
    101973284 (Tubb4b)
   05022 Pathways of neurodegeneration - multiple diseases
    101973284 (Tubb4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:iti03036]
    101973284 (Tubb4b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:iti04812]
    101973284 (Tubb4b)
   04147 Exosome [BR:iti04147]
    101973284 (Tubb4b)
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     101973284 (Tubb4b)
Cytoskeleton proteins [BR:iti04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    101973284 (Tubb4b)
Exosome [BR:iti04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101973284 (Tubb4b)
  Exosomal proteins of colorectal cancer cells
   101973284 (Tubb4b)
  Exosomal proteins of bladder cancer cells
   101973284 (Tubb4b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 101973284
NCBI-ProteinID: XP_005336936
UniProt: I3MV11
LinkDB
Position
Unknown
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEEVA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacctgcaagccgggcagtgcggcaaccagatcggcgccaagttc
tgggaggtgatcagcgacgagcatggcatcgatcctaccggcacgtaccacggggacagc
gatctgcagttggagcgcatcaatgtgtactacaacgaagccaccggtggcaagtacgtg
ccccgcgctgtgctcgtggacctggagcctggcaccatggactcggtgcgctcgggccct
tttgggcagatcttcaggccagacaacttcgttttcggtcagagtggtgctgggaacaac
tgggccaaggggcactacacagaaggcgccgagctggtggactctgtgctggatgttgtg
aggaaggaggcagagagctgtgactgcctgcagggtttccagcttacccactccctgggt
ggggggactggttctgggatgggtaccctcctcatcagcaagatccgggaggagtaccca
gacaggatcatgaacacattcagtgtggtgccctcccctaaagtgtcggacacagtggtt
gagccctacaatgccactctctcagtccaccagcttgtagaaaatacagatgaaacctat
tgcattgataatgaagccctctatgacatttgcttcagaaccctaaagctgaccacacct
acttatggtgaccttaaccacctggtgtctgccaccatgagtggggtcactacctgcctg
cgctttccaggacagcttaatgctgaccttaggaagctggctgtgaacatggtgcccttt
ccccgcctgcactttttcatgcctggctttgcccccctgaccagcaggggcagccagcag
taccgtgccctgacggtgcctgagctcacccagcagatgtttgatgccaagaacatgatg
gccgcctgcgacccccgccatggccgctacctaacagtggctgctgtgttcaggggccgc
atgtccatgaaggaggtggatgaacagatgcttaatgtccagaacaagaacagcagctat
tttgtggaatggatccccaacaatgtgaaaacagctgtctgtgacattccgccccggggg
ctaaaaatgtctgccaccttcattggcaacagcaccgccatccaggagctgttcaagcgc
atctcggagcagttcactgccatgttccgccgcaaggccttcctgcactggtacacaggt
gagggcatggacgagatggagttcactgaagctgagagcaatatgaatgacctggtgtct
gagtaccagcagtaccaggacgccacagcggaggaggagggcgagtttgaggaggaggct
gaggaggaggtggcctaa

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