Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101973349
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Entry
101973349 CDS
T10664
Symbol
Sema3f
Name
(RefSeq) semaphorin-3F isoform X1
KO
K06840
semaphorin 3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101973349 (Sema3f)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
Ig_SEMA-3_4_7A
Ig_3
PSI
I-set
ig
Ig_2
Ig_6
V-set
Motif
Other DBs
NCBI-GeneID:
101973349
NCBI-ProteinID:
XP_005327001
UniProt:
I3MR25
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MLVTGLLLWASLLSGVWSATPTQDHFQATPRVRLSYKELKATGTAHFFNFLLNTTDYRIL
LKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECVLSGKNGNGECGNFVR
LIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQASPWTRTQVVKGRGSRATDSALRPTPAA
PRQDYIFYLEPERLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPAFIHAELIPDSAERNDDKLYFFFRERSAEAPQSPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRSHPLMYQAIYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEV
LFLGTDRGTVQKVIVLPKDDQEVEELMLEEVEVFKDPAPIKTMTISSKRQQLYVASAVGV
THLSLHRCQAYGAACADCCLARDPYCAWDGQSCSRYTASSKRRSRRQDVRHGNPIRQCRG
FNSNANKNAVESVQYGVAGSTAFLECQPRSPQATVKWLFQRDPGDRRREIRAEDRFLRTE
QGLLLRALQLGDRGLYSCTATENNFKHIVTRVQLHVLGRDAVHAALFPPLPVSAPPPPGT
GPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPSPREAPEVPRPPEPQDQKKPRNRRH
HPPDT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcactggtctcctcctctgggcttccctactgagtggggtctggtcagccacc
cctacccaagaccacttccaggccactccccgcgtccggctctcatacaaagagctaaag
gccacaggcactgcccacttcttcaacttcctgctcaacaccactgactaccgaattctg
ctcaaggatgaggaccatgaccgcatgtatgtgggcagcaaggactatgtgctgtccctg
gacctacatgacatcaatcgcgaacccctcattatccactgggcggcctcccctcagcgc
attgaagagtgcgtgctctcaggcaagaatggcaatggcgagtgtgggaacttcgtcagg
ctcatccagccctggaacagaacacacctgtatgtgtgcgggacaggagcttacaaccct
atgtgcacctatgtgaaccgtggccgccgcgctcaggcctcaccatggacccgaacgcag
gtggtcaaaggccgcggcagcagagccacagacagtgccctccgcccaacacctgcagcc
ccacgccaggattacatcttctacttggagcctgagagactcgagtcaggaaagggcaaa
tgtccatatgatcccaagctggacacagcctcagctctcatcaacgaggaactctatgct
ggtgtgtacatcgattttatgggcactgatgcagctatcttccgcacacttggaaagcag
acagccatgcgcactgatcagtataattcccggtggctcaatgatcctgcattcatccac
gctgagctcatccctgacagtgcagaacgcaatgatgacaagctctacttcttcttccga
gagcggtccgcagaggcacctcagagtcctgctgtatatgcccgcatcgggcgcatctgc
ctgaatgatgacggtggtcactgctgtctggtcaacaagtggagcacattcctgaaggca
cggcttgtctgctctgtaccaggagaggatggcattgagactcactttgatgagctccag
gatgtgtttgttcagcagacccaggatgtgaggaaccccgtcatttatgctgtctttacc
tcttcaggctctgtatttcgaggctctgccgtttgtgtctactccatggctgacattcgc
atggtcttcaatggaccctttgcccacaaggagggccccaactaccaatggatgcccttc
tcagggaagatgccctacccccggcctggcacgtgtcctggcggaaccttcacaccatcc
atgaagtccaccaaagactatcctgatgaagtgatcaacttcatgcgtagtcacccactt
atgtaccaggccatataccccttgcaacggcggccattggtggtccgcacaggtgctccc
taccgtctcactactgttgctgtggaccaggtggatgcagctgatgggcgctatgaggtg
cttttcctgggcacagaccgcgggacagtgcagaaggtcattgtgttgcctaaggatgac
caggaggtggaggagctcatgctggaggaggtggaggtcttcaaggacccagcacccatt
aagaccatgaccatctcttccaagaggcaacaactatatgtggcctcagcagtgggtgtc
acacacctgagcctgcaccgctgccaggcatatggggctgcctgtgctgactgctgcctt
gcccgggacccttactgtgcctgggatggccaatcctgctcccgctatacagcatcctcc
aagaggcggagccgccggcaggatgtccggcatgggaaccccatcaggcagtgccgtggg
ttcaactccaatgctaacaagaatgctgtggagtctgtgcagtatggtgtggcaggcagc
acggccttccttgaatgccagcctcgctcaccccaagccactgttaagtggctgttccag
cgagatcctggtgaccggcgccgagagatccgtgcagaggaccgcttcctgcgtacagag
cagggcttgttgcttcgcgccctgcagctcggtgatcgtggcctctactcctgcacggcc
actgagaacaacttcaagcacatcgtcacgcgggtgcagctgcatgtactgggccgggat
gccgtccatgctgccctcttccccccactgcctgtgagcgccccaccaccccctggcaca
ggcccccccacacctccttaccaggagctggcccagctgctcgcccagccagaagtgggc
ctcatccaccagtactgccagggttactggcgtcatgtgcccccaagccccagggaggct
ccagaggtgcccaggcctcctgagcctcaggaccagaaaaagccccggaatcgccggcac
caccctccggacacatga
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